Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 HLA-K-203ENST00000430151 1046 ntBASIC13.67□□□□□ -0.22
NHLRC1Q6VVB1 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC13.67□□□□□ -0.22
NHLRC1Q6VVB1 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
NHLRC1Q6VVB1 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC13.67□□□□□ -0.22
NHLRC1Q6VVB1 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
NHLRC1Q6VVB1 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC13.67□□□□□ -0.22
NHLRC1Q6VVB1 AC124283.3-201ENST00000570869 594 ntBASIC13.67□□□□□ -0.22
NHLRC1Q6VVB1 SPDYE22P-201ENST00000582158 798 ntBASIC13.67□□□□□ -0.22
NHLRC1Q6VVB1 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC13.67□□□□□ -0.22
NHLRC1Q6VVB1 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NHLRC1Q6VVB1 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NHLRC1Q6VVB1 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC13.67□□□□□ -0.22
NHLRC1Q6VVB1 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NHLRC1Q6VVB1 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NHLRC1Q6VVB1 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NHLRC1Q6VVB1 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
NHLRC1Q6VVB1 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NHLRC1Q6VVB1 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NHLRC1Q6VVB1 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
NHLRC1Q6VVB1 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NHLRC1Q6VVB1 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
NHLRC1Q6VVB1 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
NHLRC1Q6VVB1 AGER-206ENST00000375070 1463 ntTSL 5 BASIC13.67□□□□□ -0.22
NHLRC1Q6VVB1 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
NHLRC1Q6VVB1 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC13.67□□□□□ -0.22
NHLRC1Q6VVB1 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
NHLRC1Q6VVB1 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NHLRC1Q6VVB1 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
NHLRC1Q6VVB1 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
NHLRC1Q6VVB1 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
NHLRC1Q6VVB1 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NHLRC1Q6VVB1 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NHLRC1Q6VVB1 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
NHLRC1Q6VVB1 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
NHLRC1Q6VVB1 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC13.66□□□□□ -0.22
NHLRC1Q6VVB1 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
NHLRC1Q6VVB1 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
NHLRC1Q6VVB1 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
NHLRC1Q6VVB1 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
NHLRC1Q6VVB1 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
NHLRC1Q6VVB1 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC13.66□□□□□ -0.22
NHLRC1Q6VVB1 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
NHLRC1Q6VVB1 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC13.66□□□□□ -0.22
NHLRC1Q6VVB1 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
NHLRC1Q6VVB1 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC13.66□□□□□ -0.22
NHLRC1Q6VVB1 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NHLRC1Q6VVB1 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
NHLRC1Q6VVB1 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NHLRC1Q6VVB1 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC13.66□□□□□ -0.22
NHLRC1Q6VVB1 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
NHLRC1Q6VVB1 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NHLRC1Q6VVB1 AL442647.2-201ENST00000429864 857 ntBASIC13.66□□□□□ -0.22
NHLRC1Q6VVB1 GALT-202ENST00000450095 1280 ntTSL 2 BASIC13.66□□□□□ -0.22
NHLRC1Q6VVB1 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
NHLRC1Q6VVB1 AC120045.2-201ENST00000567334 178 ntBASIC13.66□□□□□ -0.22
NHLRC1Q6VVB1 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC13.66□□□□□ -0.22
NHLRC1Q6VVB1 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
NHLRC1Q6VVB1 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC13.66□□□□□ -0.22
NHLRC1Q6VVB1 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
NHLRC1Q6VVB1 AL132655.2-201ENST00000596276 594 ntBASIC13.66□□□□□ -0.22
NHLRC1Q6VVB1 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
NHLRC1Q6VVB1 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC13.66□□□□□ -0.22
NHLRC1Q6VVB1 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC13.66□□□□□ -0.22
NHLRC1Q6VVB1 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
NHLRC1Q6VVB1 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC13.66□□□□□ -0.22
NHLRC1Q6VVB1 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC13.66□□□□□ -0.22
NHLRC1Q6VVB1 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC13.66□□□□□ -0.22
NHLRC1Q6VVB1 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC13.66□□□□□ -0.22
NHLRC1Q6VVB1 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
NHLRC1Q6VVB1 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NHLRC1Q6VVB1 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NHLRC1Q6VVB1 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
NHLRC1Q6VVB1 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
NHLRC1Q6VVB1 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC13.65□□□□□ -0.22
NHLRC1Q6VVB1 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC13.65□□□□□ -0.22
NHLRC1Q6VVB1 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NHLRC1Q6VVB1 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC13.65□□□□□ -0.22
NHLRC1Q6VVB1 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
NHLRC1Q6VVB1 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC13.65□□□□□ -0.22
NHLRC1Q6VVB1 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NHLRC1Q6VVB1 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NHLRC1Q6VVB1 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NHLRC1Q6VVB1 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
NHLRC1Q6VVB1 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NHLRC1Q6VVB1 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
NHLRC1Q6VVB1 NSL1-201ENST00000366976 722 ntTSL 2 BASIC13.65□□□□□ -0.22
NHLRC1Q6VVB1 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NHLRC1Q6VVB1 AL645937.2-201ENST00000396808 931 ntBASIC13.65□□□□□ -0.22
NHLRC1Q6VVB1 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC13.65□□□□□ -0.22
NHLRC1Q6VVB1 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
NHLRC1Q6VVB1 HMGN1P19-201ENST00000436976 333 ntBASIC13.65□□□□□ -0.22
NHLRC1Q6VVB1 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC13.65□□□□□ -0.22
NHLRC1Q6VVB1 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC13.65□□□□□ -0.22
NHLRC1Q6VVB1 OARD1-208ENST00000469104 704 ntTSL 2 BASIC13.65□□□□□ -0.22
NHLRC1Q6VVB1 ELK1P1-201ENST00000485699 580 ntBASIC13.65□□□□□ -0.22
NHLRC1Q6VVB1 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC13.65□□□□□ -0.22
NHLRC1Q6VVB1 AC123567.1-201ENST00000548294 1261 ntBASIC13.65□□□□□ -0.22
NHLRC1Q6VVB1 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC13.65□□□□□ -0.22
NHLRC1Q6VVB1 INO80C-210ENST00000590757 595 ntTSL 2 BASIC13.65□□□□□ -0.22
NHLRC1Q6VVB1 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms