Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
H3F3CQ6NXT2 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
H3F3CQ6NXT2 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC14.03□□□□□ -0.16
H3F3CQ6NXT2 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
H3F3CQ6NXT2 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC14.03□□□□□ -0.16
H3F3CQ6NXT2 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
H3F3CQ6NXT2 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
H3F3CQ6NXT2 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
H3F3CQ6NXT2 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
H3F3CQ6NXT2 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC14.02□□□□□ -0.16
H3F3CQ6NXT2 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
H3F3CQ6NXT2 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC14.02□□□□□ -0.16
H3F3CQ6NXT2 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
H3F3CQ6NXT2 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
H3F3CQ6NXT2 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
H3F3CQ6NXT2 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC14.02□□□□□ -0.16
H3F3CQ6NXT2 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
H3F3CQ6NXT2 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC14.02□□□□□ -0.16
H3F3CQ6NXT2 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
H3F3CQ6NXT2 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
H3F3CQ6NXT2 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
H3F3CQ6NXT2 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
H3F3CQ6NXT2 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
H3F3CQ6NXT2 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
H3F3CQ6NXT2 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
H3F3CQ6NXT2 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC14.02□□□□□ -0.17
H3F3CQ6NXT2 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC14.02□□□□□ -0.17
H3F3CQ6NXT2 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
H3F3CQ6NXT2 GOLGA2P4-201ENST00000441462 777 ntBASIC14.02□□□□□ -0.17
H3F3CQ6NXT2 CNN2P10-201ENST00000443067 918 ntBASIC14.02□□□□□ -0.17
H3F3CQ6NXT2 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC14.02□□□□□ -0.17
H3F3CQ6NXT2 AC108725.1-201ENST00000495472 409 ntBASIC14.02□□□□□ -0.17
H3F3CQ6NXT2 FAM86HP-204ENST00000513466 959 ntBASIC14.02□□□□□ -0.17
H3F3CQ6NXT2 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC14.02□□□□□ -0.17
H3F3CQ6NXT2 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
H3F3CQ6NXT2 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC14.02□□□□□ -0.17
H3F3CQ6NXT2 HNRNPA1P48-202ENST00000565308 961 ntBASIC14.02□□□□□ -0.17
H3F3CQ6NXT2 DERL2-202ENST00000570848 657 ntTSL 5 BASIC14.02□□□□□ -0.17
H3F3CQ6NXT2 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC14.02□□□□□ -0.17
H3F3CQ6NXT2 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
H3F3CQ6NXT2 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC14.02□□□□□ -0.17
H3F3CQ6NXT2 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
H3F3CQ6NXT2 PRAL-201ENST00000624952 3286 ntBASIC14.02□□□□□ -0.17
H3F3CQ6NXT2 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
H3F3CQ6NXT2 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
H3F3CQ6NXT2 TNRC18P2-201ENST00000417666 2714 ntBASIC14.02□□□□□ -0.17
H3F3CQ6NXT2 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC14.02□□□□□ -0.17
H3F3CQ6NXT2 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
H3F3CQ6NXT2 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
H3F3CQ6NXT2 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
H3F3CQ6NXT2 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
H3F3CQ6NXT2 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC14.02□□□□□ -0.17
H3F3CQ6NXT2 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
H3F3CQ6NXT2 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC14.02□□□□□ -0.17
H3F3CQ6NXT2 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
H3F3CQ6NXT2 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
H3F3CQ6NXT2 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
H3F3CQ6NXT2 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
H3F3CQ6NXT2 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
H3F3CQ6NXT2 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
H3F3CQ6NXT2 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
H3F3CQ6NXT2 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
H3F3CQ6NXT2 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
H3F3CQ6NXT2 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
H3F3CQ6NXT2 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC14.01□□□□□ -0.17
H3F3CQ6NXT2 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
H3F3CQ6NXT2 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
H3F3CQ6NXT2 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
H3F3CQ6NXT2 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
H3F3CQ6NXT2 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
H3F3CQ6NXT2 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
H3F3CQ6NXT2 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
H3F3CQ6NXT2 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC14.01□□□□□ -0.17
H3F3CQ6NXT2 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC14.01□□□□□ -0.17
H3F3CQ6NXT2 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
H3F3CQ6NXT2 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC14.01□□□□□ -0.17
H3F3CQ6NXT2 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
H3F3CQ6NXT2 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC14.01□□□□□ -0.17
H3F3CQ6NXT2 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
H3F3CQ6NXT2 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
H3F3CQ6NXT2 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
H3F3CQ6NXT2 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
H3F3CQ6NXT2 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
H3F3CQ6NXT2 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
H3F3CQ6NXT2 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
H3F3CQ6NXT2 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
H3F3CQ6NXT2 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
H3F3CQ6NXT2 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
H3F3CQ6NXT2 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
H3F3CQ6NXT2 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC14.01□□□□□ -0.17
H3F3CQ6NXT2 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC14.01□□□□□ -0.17
H3F3CQ6NXT2 FAM8A4P-201ENST00000435433 1213 ntBASIC14.01□□□□□ -0.17
H3F3CQ6NXT2 HOMER2P2-201ENST00000451621 847 ntBASIC14.01□□□□□ -0.17
H3F3CQ6NXT2 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC14.01□□□□□ -0.17
H3F3CQ6NXT2 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
H3F3CQ6NXT2 AGER-214ENST00000538695 487 ntTSL 2 BASIC14.01□□□□□ -0.17
H3F3CQ6NXT2 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
H3F3CQ6NXT2 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC14.01□□□□□ -0.17
H3F3CQ6NXT2 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
H3F3CQ6NXT2 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms