Protein–RNA interactions for Protein: Q3KP44

ANKRD55, Ankyrin repeat domain-containing protein 55, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD55Q3KP44 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
ANKRD55Q3KP44 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC12.64□□□□□ -0.39
ANKRD55Q3KP44 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
ANKRD55Q3KP44 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC12.64□□□□□ -0.39
ANKRD55Q3KP44 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
ANKRD55Q3KP44 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
ANKRD55Q3KP44 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
ANKRD55Q3KP44 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC12.64□□□□□ -0.39
ANKRD55Q3KP44 NIN-202ENST00000324330 4364 ntTSL 5 BASIC12.64□□□□□ -0.39
ANKRD55Q3KP44 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
ANKRD55Q3KP44 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
ANKRD55Q3KP44 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
ANKRD55Q3KP44 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
ANKRD55Q3KP44 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
ANKRD55Q3KP44 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
ANKRD55Q3KP44 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
ANKRD55Q3KP44 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC12.64□□□□□ -0.39
ANKRD55Q3KP44 AC016397.2-201ENST00000624848 1985 ntBASIC12.64□□□□□ -0.39
ANKRD55Q3KP44 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC12.64□□□□□ -0.39
ANKRD55Q3KP44 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC12.64□□□□□ -0.39
ANKRD55Q3KP44 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
ANKRD55Q3KP44 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
ANKRD55Q3KP44 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
ANKRD55Q3KP44 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
ANKRD55Q3KP44 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
ANKRD55Q3KP44 AC023274.1-201ENST00000418278 595 ntBASIC12.64□□□□□ -0.39
ANKRD55Q3KP44 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC12.64□□□□□ -0.39
ANKRD55Q3KP44 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
ANKRD55Q3KP44 ACTG1P14-201ENST00000446382 1122 ntBASIC12.64□□□□□ -0.39
ANKRD55Q3KP44 AC112191.1-201ENST00000523689 701 ntBASIC12.64□□□□□ -0.39
ANKRD55Q3KP44 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
ANKRD55Q3KP44 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
ANKRD55Q3KP44 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC12.64□□□□□ -0.39
ANKRD55Q3KP44 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC12.64□□□□□ -0.39
ANKRD55Q3KP44 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC12.64□□□□□ -0.39
ANKRD55Q3KP44 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC12.64□□□□□ -0.39
ANKRD55Q3KP44 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
ANKRD55Q3KP44 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
ANKRD55Q3KP44 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
ANKRD55Q3KP44 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC12.64□□□□□ -0.39
ANKRD55Q3KP44 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
ANKRD55Q3KP44 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
ANKRD55Q3KP44 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC12.64□□□□□ -0.39
ANKRD55Q3KP44 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC12.64□□□□□ -0.39
ANKRD55Q3KP44 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC12.64□□□□□ -0.39
ANKRD55Q3KP44 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC12.64□□□□□ -0.39
ANKRD55Q3KP44 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
ANKRD55Q3KP44 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
ANKRD55Q3KP44 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
ANKRD55Q3KP44 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
ANKRD55Q3KP44 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
ANKRD55Q3KP44 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
ANKRD55Q3KP44 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
ANKRD55Q3KP44 GOLGA8VP-201ENST00000559009 1798 ntBASIC12.64□□□□□ -0.39
ANKRD55Q3KP44 AKAP8P1-201ENST00000434743 1349 ntBASIC12.63□□□□□ -0.39
ANKRD55Q3KP44 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC12.63□□□□□ -0.39
ANKRD55Q3KP44 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
ANKRD55Q3KP44 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC12.63□□□□□ -0.39
ANKRD55Q3KP44 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ANKRD55Q3KP44 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC12.63□□□□□ -0.39
ANKRD55Q3KP44 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
ANKRD55Q3KP44 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ANKRD55Q3KP44 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
ANKRD55Q3KP44 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
ANKRD55Q3KP44 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ANKRD55Q3KP44 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
ANKRD55Q3KP44 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
ANKRD55Q3KP44 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ANKRD55Q3KP44 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC12.63□□□□□ -0.39
ANKRD55Q3KP44 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
ANKRD55Q3KP44 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
ANKRD55Q3KP44 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ANKRD55Q3KP44 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ANKRD55Q3KP44 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC12.63□□□□□ -0.39
ANKRD55Q3KP44 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC12.63□□□□□ -0.39
ANKRD55Q3KP44 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC12.63□□□□□ -0.39
ANKRD55Q3KP44 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
ANKRD55Q3KP44 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
ANKRD55Q3KP44 AC104457.1-201ENST00000401024 814 ntBASIC12.63□□□□□ -0.39
ANKRD55Q3KP44 MIR1233-2-201ENST00000408138 82 ntBASIC12.63□□□□□ -0.39
ANKRD55Q3KP44 MIR1233-1-201ENST00000408722 82 ntBASIC12.63□□□□□ -0.39
ANKRD55Q3KP44 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC12.63□□□□□ -0.39
ANKRD55Q3KP44 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC12.63□□□□□ -0.39
ANKRD55Q3KP44 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
ANKRD55Q3KP44 KRT18P2-201ENST00000447938 1258 ntBASIC12.63□□□□□ -0.39
ANKRD55Q3KP44 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
ANKRD55Q3KP44 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC12.63□□□□□ -0.39
ANKRD55Q3KP44 AC022447.6-201ENST00000515522 438 ntBASIC12.63□□□□□ -0.39
ANKRD55Q3KP44 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC12.63□□□□□ -0.39
ANKRD55Q3KP44 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC12.63□□□□□ -0.39
ANKRD55Q3KP44 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
ANKRD55Q3KP44 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC12.63□□□□□ -0.39
ANKRD55Q3KP44 AC023511.2-201ENST00000618803 211 ntBASIC12.63□□□□□ -0.39
ANKRD55Q3KP44 C20orf181-201ENST00000623918 480 ntBASIC12.63□□□□□ -0.39
ANKRD55Q3KP44 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ANKRD55Q3KP44 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC12.63□□□□□ -0.39
ANKRD55Q3KP44 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
ANKRD55Q3KP44 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC12.63□□□□□ -0.39
ANKRD55Q3KP44 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC12.63□□□□□ -0.39
ANKRD55Q3KP44 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms