Protein–RNA interactions for Protein: P61088

UBE2N, Ubiquitin-conjugating enzyme E2 N, humanhuman

Known RBP Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2NP61088 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
UBE2NP61088 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
UBE2NP61088 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
UBE2NP61088 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC13.37□□□□□ -0.27
UBE2NP61088 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
UBE2NP61088 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
UBE2NP61088 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
UBE2NP61088 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
UBE2NP61088 AC073347.1-201ENST00000421633 2643 ntBASIC13.37□□□□□ -0.27
UBE2NP61088 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
UBE2NP61088 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
UBE2NP61088 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
UBE2NP61088 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
UBE2NP61088 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC13.37□□□□□ -0.27
UBE2NP61088 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC13.36□□□□□ -0.27
UBE2NP61088 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
UBE2NP61088 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
UBE2NP61088 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC13.36□□□□□ -0.27
UBE2NP61088 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
UBE2NP61088 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
UBE2NP61088 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
UBE2NP61088 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
UBE2NP61088 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC13.36□□□□□ -0.27
UBE2NP61088 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
UBE2NP61088 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
UBE2NP61088 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
UBE2NP61088 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
UBE2NP61088 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
UBE2NP61088 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
UBE2NP61088 WASH3P-207ENST00000560956 1394 ntBASIC13.36□□□□□ -0.27
UBE2NP61088 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC13.36□□□□□ -0.27
UBE2NP61088 PPT1-215ENST00000641471 2368 ntBASIC13.36□□□□□ -0.27
UBE2NP61088 PGR-210ENST00000619228 3038 ntTSL 5 BASIC13.36□□□□□ -0.27
UBE2NP61088 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
UBE2NP61088 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
UBE2NP61088 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
UBE2NP61088 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
UBE2NP61088 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
UBE2NP61088 AL139094.1-201ENST00000405549 1188 ntBASIC13.36□□□□□ -0.27
UBE2NP61088 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC13.36□□□□□ -0.27
UBE2NP61088 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC13.36□□□□□ -0.27
UBE2NP61088 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC13.36□□□□□ -0.27
UBE2NP61088 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC13.36□□□□□ -0.27
UBE2NP61088 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC13.36□□□□□ -0.27
UBE2NP61088 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC13.36□□□□□ -0.27
UBE2NP61088 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC13.36□□□□□ -0.27
UBE2NP61088 RAB43P1-201ENST00000561790 589 ntBASIC13.36□□□□□ -0.27
UBE2NP61088 APOC4-201ENST00000591600 348 ntTSL 3 BASIC13.36□□□□□ -0.27
UBE2NP61088 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
UBE2NP61088 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
UBE2NP61088 AL162274.1-201ENST00000617191 1098 ntBASIC13.36□□□□□ -0.27
UBE2NP61088 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC13.36□□□□□ -0.27
UBE2NP61088 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
UBE2NP61088 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
UBE2NP61088 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
UBE2NP61088 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
UBE2NP61088 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC13.36□□□□□ -0.27
UBE2NP61088 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
UBE2NP61088 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
UBE2NP61088 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
UBE2NP61088 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
UBE2NP61088 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
UBE2NP61088 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
UBE2NP61088 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
UBE2NP61088 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC13.36□□□□□ -0.27
UBE2NP61088 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
UBE2NP61088 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC13.36□□□□□ -0.27
UBE2NP61088 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
UBE2NP61088 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
UBE2NP61088 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC13.36□□□□□ -0.27
UBE2NP61088 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
UBE2NP61088 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
UBE2NP61088 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC13.36□□□□□ -0.27
UBE2NP61088 USP3-204ENST00000540797 5474 ntTSL 2 BASIC13.36□□□□□ -0.27
UBE2NP61088 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
UBE2NP61088 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC13.35□□□□□ -0.27
UBE2NP61088 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
UBE2NP61088 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
UBE2NP61088 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
UBE2NP61088 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
UBE2NP61088 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
UBE2NP61088 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC13.35□□□□□ -0.27
UBE2NP61088 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
UBE2NP61088 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC13.35□□□□□ -0.27
UBE2NP61088 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC13.35□□□□□ -0.27
UBE2NP61088 AC138035.3-201ENST00000622706 2791 ntBASIC13.35□□□□□ -0.27
UBE2NP61088 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC13.35□□□□□ -0.27
UBE2NP61088 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
UBE2NP61088 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
UBE2NP61088 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
UBE2NP61088 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
UBE2NP61088 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
UBE2NP61088 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC13.35□□□□□ -0.27
UBE2NP61088 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
UBE2NP61088 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
UBE2NP61088 MXI1-205ENST00000393134 889 ntTSL 2 BASIC13.35□□□□□ -0.27
UBE2NP61088 AC104457.1-201ENST00000401024 814 ntBASIC13.35□□□□□ -0.27
UBE2NP61088 BOLA2P3-201ENST00000404566 256 ntBASIC13.35□□□□□ -0.27
UBE2NP61088 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
UBE2NP61088 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms