Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 REXO1L2P-201ENST00000425429 2069 ntBASIC11.28□□□□□ -0.6
CMC4P56277 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
CMC4P56277 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC11.27□□□□□ -0.6
CMC4P56277 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
CMC4P56277 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC11.27□□□□□ -0.6
CMC4P56277 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
CMC4P56277 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
CMC4P56277 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC11.27□□□□□ -0.6
CMC4P56277 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
CMC4P56277 AC006486.2-201ENST00000624246 2199 ntBASIC11.27□□□□□ -0.6
CMC4P56277 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
CMC4P56277 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC11.27□□□□□ -0.6
CMC4P56277 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
CMC4P56277 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
CMC4P56277 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
CMC4P56277 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
CMC4P56277 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC11.27□□□□□ -0.61
CMC4P56277 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC11.27□□□□□ -0.61
CMC4P56277 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
CMC4P56277 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
CMC4P56277 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.61
CMC4P56277 AC055811.4-201ENST00000624039 1754 ntBASIC11.27□□□□□ -0.61
CMC4P56277 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
CMC4P56277 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
CMC4P56277 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
CMC4P56277 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC11.27□□□□□ -0.61
CMC4P56277 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC11.27□□□□□ -0.61
CMC4P56277 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
CMC4P56277 HLA-K-203ENST00000430151 1046 ntBASIC11.27□□□□□ -0.61
CMC4P56277 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
CMC4P56277 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
CMC4P56277 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC11.27□□□□□ -0.61
CMC4P56277 KLF2P4-201ENST00000451959 1225 ntBASIC11.27□□□□□ -0.61
CMC4P56277 FTLP10-202ENST00000505798 471 ntBASIC11.27□□□□□ -0.61
CMC4P56277 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC11.27□□□□□ -0.61
CMC4P56277 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC11.27□□□□□ -0.61
CMC4P56277 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC11.27□□□□□ -0.61
CMC4P56277 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC11.27□□□□□ -0.61
CMC4P56277 RHOXF1P1-202ENST00000635473 501 ntBASIC11.27□□□□□ -0.61
CMC4P56277 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
CMC4P56277 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
CMC4P56277 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.61
CMC4P56277 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
CMC4P56277 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC11.27□□□□□ -0.61
CMC4P56277 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
CMC4P56277 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
CMC4P56277 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
CMC4P56277 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
CMC4P56277 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
CMC4P56277 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC11.27□□□□□ -0.61
CMC4P56277 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
CMC4P56277 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
CMC4P56277 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
CMC4P56277 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
CMC4P56277 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC11.27□□□□□ -0.61
CMC4P56277 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC11.27□□□□□ -0.61
CMC4P56277 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
CMC4P56277 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
CMC4P56277 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC11.26□□□□□ -0.61
CMC4P56277 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
CMC4P56277 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
CMC4P56277 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC11.26□□□□□ -0.61
CMC4P56277 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
CMC4P56277 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC11.26□□□□□ -0.61
CMC4P56277 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
CMC4P56277 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC11.26□□□□□ -0.61
CMC4P56277 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
CMC4P56277 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
CMC4P56277 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
CMC4P56277 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
CMC4P56277 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
CMC4P56277 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
CMC4P56277 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC11.26□□□□□ -0.61
CMC4P56277 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
CMC4P56277 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
CMC4P56277 AC138035.3-201ENST00000622706 2791 ntBASIC11.26□□□□□ -0.61
CMC4P56277 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
CMC4P56277 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC11.26□□□□□ -0.61
CMC4P56277 WDFY2-203ENST00000612477 6932 ntTSL 2 BASIC11.26□□□□□ -0.61
CMC4P56277 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
CMC4P56277 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
CMC4P56277 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC11.26□□□□□ -0.61
CMC4P56277 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
CMC4P56277 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
CMC4P56277 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
CMC4P56277 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
CMC4P56277 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
CMC4P56277 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
CMC4P56277 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
CMC4P56277 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
CMC4P56277 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC11.26□□□□□ -0.61
CMC4P56277 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
CMC4P56277 ARSEP1-201ENST00000420443 635 ntBASIC11.26□□□□□ -0.61
CMC4P56277 AC007969.1-201ENST00000433675 447 ntBASIC11.26□□□□□ -0.61
CMC4P56277 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
CMC4P56277 AHRR-211ENST00000515206 462 ntTSL 5 BASIC11.26□□□□□ -0.61
CMC4P56277 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC11.26□□□□□ -0.61
CMC4P56277 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
CMC4P56277 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC11.26□□□□□ -0.61
CMC4P56277 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC11.26□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms