Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LIMK1P53667 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LIMK1P53667 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
LIMK1P53667 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LIMK1P53667 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
LIMK1P53667 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
LIMK1P53667 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LIMK1P53667 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
LIMK1P53667 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
LIMK1P53667 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC14.91□□□□□ -0.02
LIMK1P53667 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LIMK1P53667 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
LIMK1P53667 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
LIMK1P53667 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC14.91□□□□□ -0.02
LIMK1P53667 AL139094.1-201ENST00000405549 1188 ntBASIC14.91□□□□□ -0.02
LIMK1P53667 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LIMK1P53667 MIR1227-201ENST00000408484 88 ntBASIC14.91□□□□□ -0.02
LIMK1P53667 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC14.91□□□□□ -0.02
LIMK1P53667 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LIMK1P53667 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC14.91□□□□□ -0.02
LIMK1P53667 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC14.91□□□□□ -0.02
LIMK1P53667 AC116345.2-201ENST00000512837 523 ntBASIC14.91□□□□□ -0.02
LIMK1P53667 CTBP2P4-201ENST00000513884 920 ntBASIC14.91□□□□□ -0.02
LIMK1P53667 IGLV3-15-201ENST00000518356 244 ntBASIC14.91□□□□□ -0.02
LIMK1P53667 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
LIMK1P53667 RTN3P1-201ENST00000536295 711 ntBASIC14.91□□□□□ -0.02
LIMK1P53667 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC14.91□□□□□ -0.02
LIMK1P53667 DNM1P30-201ENST00000563586 452 ntBASIC14.91□□□□□ -0.02
LIMK1P53667 ZSCAN10-205ENST00000572548 618 ntTSL 3 BASIC14.91□□□□□ -0.02
LIMK1P53667 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC14.91□□□□□ -0.02
LIMK1P53667 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC14.91□□□□□ -0.02
LIMK1P53667 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LIMK1P53667 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
LIMK1P53667 AC009084.3-201ENST00000623356 437 ntBASIC14.91□□□□□ -0.02
LIMK1P53667 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC14.91□□□□□ -0.02
LIMK1P53667 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LIMK1P53667 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LIMK1P53667 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LIMK1P53667 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LIMK1P53667 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC14.91□□□□□ -0.02
LIMK1P53667 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC14.91□□□□□ -0.02
LIMK1P53667 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC14.91□□□□□ -0.02
LIMK1P53667 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC14.91□□□□□ -0.02
LIMK1P53667 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LIMK1P53667 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
LIMK1P53667 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LIMK1P53667 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
LIMK1P53667 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
LIMK1P53667 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC14.91□□□□□ -0.02
LIMK1P53667 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
LIMK1P53667 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
LIMK1P53667 AC138035.3-201ENST00000622706 2791 ntBASIC14.9□□□□□ -0.02
LIMK1P53667 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC14.9□□□□□ -0.02
LIMK1P53667 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC14.9□□□□□ -0.02
LIMK1P53667 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LIMK1P53667 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LIMK1P53667 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LIMK1P53667 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
LIMK1P53667 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LIMK1P53667 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC14.9□□□□□ -0.02
LIMK1P53667 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LIMK1P53667 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LIMK1P53667 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LIMK1P53667 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LIMK1P53667 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC14.9□□□□□ -0.02
LIMK1P53667 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC14.9□□□□□ -0.02
LIMK1P53667 PUDPP3-201ENST00000445368 636 ntBASIC14.9□□□□□ -0.02
LIMK1P53667 RPL7P35-201ENST00000446943 740 ntBASIC14.9□□□□□ -0.02
LIMK1P53667 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LIMK1P53667 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
LIMK1P53667 PTK2-225ENST00000520892 571 ntTSL 4 BASIC14.9□□□□□ -0.02
LIMK1P53667 NEU3-205ENST00000531619 582 ntTSL 5 BASIC14.9□□□□□ -0.02
LIMK1P53667 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC14.9□□□□□ -0.02
LIMK1P53667 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC14.9□□□□□ -0.02
LIMK1P53667 AC005324.6-201ENST00000587972 613 ntBASIC14.9□□□□□ -0.02
LIMK1P53667 UBL5-208ENST00000593087 320 ntTSL 3 BASIC14.9□□□□□ -0.02
LIMK1P53667 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC14.9□□□□□ -0.02
LIMK1P53667 AC092171.5-201ENST00000608012 942 ntBASIC14.9□□□□□ -0.02
LIMK1P53667 AC068587.8-201ENST00000641239 219 ntBASIC14.9□□□□□ -0.02
LIMK1P53667 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LIMK1P53667 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LIMK1P53667 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC14.9□□□□□ -0.02
LIMK1P53667 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
LIMK1P53667 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LIMK1P53667 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LIMK1P53667 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
LIMK1P53667 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
LIMK1P53667 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC14.9□□□□□ -0.02
LIMK1P53667 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
LIMK1P53667 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC14.9□□□□□ -0.02
LIMK1P53667 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LIMK1P53667 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
LIMK1P53667 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
LIMK1P53667 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LIMK1P53667 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LIMK1P53667 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
LIMK1P53667 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LIMK1P53667 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LIMK1P53667 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC14.89□□□□□ -0.03
LIMK1P53667 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms