Protein–RNA interactions for Protein: P48730

CSNK1D, Casein kinase I isoform delta, humanhuman

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1DP48730 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC15.11■□□□□ 0.01
CSNK1DP48730 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC15.11■□□□□ 0.01
CSNK1DP48730 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC15.11■□□□□ 0.01
CSNK1DP48730 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CSNK1DP48730 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CSNK1DP48730 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CSNK1DP48730 INE2-201ENST00000630399 1874 ntBASIC15.11■□□□□ 0.01
CSNK1DP48730 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CSNK1DP48730 AC018442.1-201ENST00000421439 2061 ntBASIC15.11■□□□□ 0.01
CSNK1DP48730 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC15.11■□□□□ 0.01
CSNK1DP48730 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CSNK1DP48730 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CSNK1DP48730 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CSNK1DP48730 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CSNK1DP48730 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CSNK1DP48730 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
CSNK1DP48730 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CSNK1DP48730 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC15.11■□□□□ 0.01
CSNK1DP48730 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CSNK1DP48730 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CSNK1DP48730 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC15.11■□□□□ 0.01
CSNK1DP48730 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC15.11■□□□□ 0.01
CSNK1DP48730 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CSNK1DP48730 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CSNK1DP48730 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC15.1■□□□□ 0.01
CSNK1DP48730 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CSNK1DP48730 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC15.1■□□□□ 0.01
CSNK1DP48730 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CSNK1DP48730 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC15.1■□□□□ 0.01
CSNK1DP48730 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CSNK1DP48730 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CSNK1DP48730 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CSNK1DP48730 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CSNK1DP48730 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC15.1■□□□□ 0.01
CSNK1DP48730 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CSNK1DP48730 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
CSNK1DP48730 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CSNK1DP48730 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CSNK1DP48730 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CSNK1DP48730 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CSNK1DP48730 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CSNK1DP48730 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC15.1■□□□□ 0.01
CSNK1DP48730 GCOM2-201ENST00000509133 1104 ntBASIC15.1■□□□□ 0.01
CSNK1DP48730 NCK2-206ENST00000522586 490 ntTSL 5 BASIC15.1■□□□□ 0.01
CSNK1DP48730 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC15.1■□□□□ 0.01
CSNK1DP48730 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC15.1■□□□□ 0.01
CSNK1DP48730 HNRNPA1P48-202ENST00000565308 961 ntBASIC15.1■□□□□ 0.01
CSNK1DP48730 PPY2P-201ENST00000582808 702 ntBASIC15.1■□□□□ 0.01
CSNK1DP48730 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CSNK1DP48730 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC15.1■□□□□ 0.01
CSNK1DP48730 AC010328.2-201ENST00000597698 1111 ntBASIC15.1■□□□□ 0.01
CSNK1DP48730 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CSNK1DP48730 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CSNK1DP48730 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CSNK1DP48730 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CSNK1DP48730 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC15.1■□□□□ 0.01
CSNK1DP48730 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC15.1■□□□□ 0.01
CSNK1DP48730 TUBB1P2-201ENST00000422712 1306 ntBASIC15.1■□□□□ 0.01
CSNK1DP48730 TUBB1P1-201ENST00000503144 1300 ntBASIC15.1■□□□□ 0.01
CSNK1DP48730 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CSNK1DP48730 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CSNK1DP48730 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CSNK1DP48730 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC15.1■□□□□ 0.01
CSNK1DP48730 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CSNK1DP48730 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CSNK1DP48730 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CSNK1DP48730 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
CSNK1DP48730 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC15.1■□□□□ 0.01
CSNK1DP48730 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
CSNK1DP48730 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CSNK1DP48730 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CSNK1DP48730 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC15.09■□□□□ 0.01
CSNK1DP48730 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC15.09■□□□□ 0.01
CSNK1DP48730 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
CSNK1DP48730 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
CSNK1DP48730 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CSNK1DP48730 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CSNK1DP48730 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CSNK1DP48730 AC013726.1-201ENST00000563747 2285 ntBASIC15.09■□□□□ 0.01
CSNK1DP48730 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
CSNK1DP48730 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
CSNK1DP48730 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
CSNK1DP48730 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC15.09■□□□□ 0.01
CSNK1DP48730 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC15.09■□□□□ 0.01
CSNK1DP48730 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC15.09■□□□□ 0.01
CSNK1DP48730 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
CSNK1DP48730 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CSNK1DP48730 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CSNK1DP48730 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC15.09■□□□□ 0.01
CSNK1DP48730 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
CSNK1DP48730 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC15.09■□□□□ 0.01
CSNK1DP48730 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC15.09■□□□□ 0.01
CSNK1DP48730 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC15.09■□□□□ 0.01
CSNK1DP48730 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC15.09■□□□□ 0.01
CSNK1DP48730 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
CSNK1DP48730 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC15.09■□□□□ 0.01
CSNK1DP48730 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC15.09■□□□□ 0.01
CSNK1DP48730 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC15.09■□□□□ 0.01
CSNK1DP48730 AC008825.2-201ENST00000603374 718 ntBASIC15.09■□□□□ 0.01
CSNK1DP48730 AC002472.3-201ENST00000640124 621 ntBASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms