Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 AADACL2-AS1-202ENST00000483843 628 ntTSL 5 BASIC16.47■□□□□ 0.23
HTTP42858 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC16.47■□□□□ 0.23
HTTP42858 F11R-204ENST00000537746 1245 ntTSL 2 BASIC16.47■□□□□ 0.23
HTTP42858 CCDC113-206ENST00000616795 891 ntTSL 5 BASIC16.47■□□□□ 0.23
HTTP42858 HIST1H3B-201ENST00000621411 411 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
HTTP42858 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
HTTP42858 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
HTTP42858 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
HTTP42858 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
HTTP42858 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
HTTP42858 PCK2-208ENST00000559250 1804 ntTSL 5 BASIC16.47■□□□□ 0.23
HTTP42858 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC16.47■□□□□ 0.23
HTTP42858 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
HTTP42858 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
HTTP42858 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HTTP42858 LINC01983-201ENST00000413586 574 ntTSL 2 BASIC16.47■□□□□ 0.23
HTTP42858 AL356417.1-201ENST00000421161 845 ntTSL 3 BASIC16.47■□□□□ 0.23
HTTP42858 IGKV1OR-2-201ENST00000457995 350 ntBASIC16.47■□□□□ 0.23
HTTP42858 RPS18P9-201ENST00000482817 460 ntBASIC16.47■□□□□ 0.23
HTTP42858 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC16.47■□□□□ 0.23
HTTP42858 OR2A1-AS1-210ENST00000496968 531 ntBASIC16.47■□□□□ 0.23
HTTP42858 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
HTTP42858 MIR6746-201ENST00000620971 63 ntBASIC16.47■□□□□ 0.23
HTTP42858 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
HTTP42858 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HTTP42858 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HTTP42858 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HTTP42858 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC16.46■□□□□ 0.23
HTTP42858 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC16.46■□□□□ 0.23
HTTP42858 MIR645-201ENST00000385283 94 ntBASIC16.46■□□□□ 0.23
HTTP42858 LINC01022-201ENST00000415652 394 ntTSL 3 BASIC16.46■□□□□ 0.23
HTTP42858 AC010900.1-201ENST00000449849 1296 ntBASIC16.46■□□□□ 0.23
HTTP42858 AC006529.1-201ENST00000459978 637 ntBASIC16.46■□□□□ 0.23
HTTP42858 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
HTTP42858 GOLGA2P7-209ENST00000560408 745 ntBASIC16.46■□□□□ 0.23
HTTP42858 ZNF175-204ENST00000596504 580 ntTSL 2 BASIC16.46■□□□□ 0.23
HTTP42858 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HTTP42858 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HTTP42858 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HTTP42858 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC16.46■□□□□ 0.23
HTTP42858 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.46■□□□□ 0.23
HTTP42858 BCCIP-203ENST00000368759 1433 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HTTP42858 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HTTP42858 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC16.46■□□□□ 0.23
HTTP42858 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HTTP42858 SNRPC-201ENST00000244520 842 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HTTP42858 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
HTTP42858 AC138409.2-203ENST00000508395 553 ntTSL 4 BASIC16.46■□□□□ 0.23
HTTP42858 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HTTP42858 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HTTP42858 AP002353.1-201ENST00000528257 1599 ntBASIC16.46■□□□□ 0.23
HTTP42858 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.46■□□□□ 0.23
HTTP42858 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC16.46■□□□□ 0.23
HTTP42858 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HTTP42858 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
HTTP42858 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
HTTP42858 RNF212-201ENST00000333673 1019 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
HTTP42858 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC16.45■□□□□ 0.22
HTTP42858 FOXP4-AS1-202ENST00000432751 409 ntTSL 2 BASIC16.45■□□□□ 0.22
HTTP42858 RPL3P5-201ENST00000441645 1232 ntBASIC16.45■□□□□ 0.22
HTTP42858 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC16.45■□□□□ 0.22
HTTP42858 AL353622.2-201ENST00000605846 425 ntBASIC16.45■□□□□ 0.22
HTTP42858 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC16.45■□□□□ 0.22
HTTP42858 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC16.45■□□□□ 0.22
HTTP42858 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC16.45■□□□□ 0.22
HTTP42858 WARS-232ENST00000556645 2508 ntTSL 5 BASIC16.45■□□□□ 0.22
HTTP42858 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HTTP42858 NNMT-203ENST00000535401 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HTTP42858 OPN1SW-201ENST00000249389 1096 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HTTP42858 PRELID3B-202ENST00000371033 943 ntTSL 2 BASIC16.45■□□□□ 0.22
HTTP42858 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC16.45■□□□□ 0.22
HTTP42858 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC16.45■□□□□ 0.22
HTTP42858 AC092896.1-201ENST00000465850 380 ntBASIC16.45■□□□□ 0.22
HTTP42858 TRMT112P3-201ENST00000580149 358 ntBASIC16.45■□□□□ 0.22
HTTP42858 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC16.45■□□□□ 0.22
HTTP42858 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HTTP42858 KRT8P28-201ENST00000433288 1390 ntBASIC16.45■□□□□ 0.22
HTTP42858 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HTTP42858 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
HTTP42858 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
HTTP42858 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
HTTP42858 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HTTP42858 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HTTP42858 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC16.45■□□□□ 0.22
HTTP42858 ZNF614-202ENST00000356322 1293 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HTTP42858 NAA60-205ENST00000424546 1149 ntTSL 2 BASIC16.45■□□□□ 0.22
HTTP42858 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC16.45■□□□□ 0.22
HTTP42858 OSMR-AS1-204ENST00000636516 850 ntTSL 5 BASIC16.45■□□□□ 0.22
HTTP42858 SHANK2-202ENST00000357171 1373 ntTSL 5 BASIC16.45■□□□□ 0.22
HTTP42858 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HTTP42858 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HTTP42858 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC16.44■□□□□ 0.22
HTTP42858 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HTTP42858 OR10N1P-201ENST00000392758 869 ntBASIC16.44■□□□□ 0.22
HTTP42858 AL355537.2-201ENST00000453367 375 ntTSL 2 BASIC16.44■□□□□ 0.22
HTTP42858 OR5BD1P-201ENST00000532527 817 ntBASIC16.44■□□□□ 0.22
HTTP42858 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC16.44■□□□□ 0.22
HTTP42858 AC012617.1-201ENST00000586345 797 ntTSL 2 BASIC16.44■□□□□ 0.22
HTTP42858 SELENOW-212ENST00000601048 888 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HTTP42858 WASH7P-201ENST00000488147 1351 ntBASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms