Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
RFC4P35249 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC18.78■□□□□ 0.6
RFC4P35249 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
RFC4P35249 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RFC4P35249 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RFC4P35249 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
RFC4P35249 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
RFC4P35249 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RFC4P35249 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
RFC4P35249 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC18.78■□□□□ 0.6
RFC4P35249 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RFC4P35249 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC18.78■□□□□ 0.6
RFC4P35249 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC18.78■□□□□ 0.6
RFC4P35249 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
RFC4P35249 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RFC4P35249 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC18.77■□□□□ 0.6
RFC4P35249 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RFC4P35249 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
RFC4P35249 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RFC4P35249 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RFC4P35249 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC18.77■□□□□ 0.6
RFC4P35249 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
RFC4P35249 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC18.77■□□□□ 0.6
RFC4P35249 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
RFC4P35249 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
RFC4P35249 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC18.77■□□□□ 0.6
RFC4P35249 TLE1P1-201ENST00000422965 589 ntBASIC18.77■□□□□ 0.6
RFC4P35249 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC18.77■□□□□ 0.6
RFC4P35249 AL035414.1-201ENST00000451327 857 ntBASIC18.77■□□□□ 0.6
RFC4P35249 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC18.77■□□□□ 0.6
RFC4P35249 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC18.77■□□□□ 0.6
RFC4P35249 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC18.77■□□□□ 0.6
RFC4P35249 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RFC4P35249 UPF3AP2-202ENST00000578315 730 ntTSL 5 BASIC18.77■□□□□ 0.6
RFC4P35249 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
RFC4P35249 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC18.77■□□□□ 0.6
RFC4P35249 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC18.77■□□□□ 0.6
RFC4P35249 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC18.77■□□□□ 0.6
RFC4P35249 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
RFC4P35249 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RFC4P35249 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
RFC4P35249 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RFC4P35249 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC18.77■□□□□ 0.6
RFC4P35249 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
RFC4P35249 STK33-217ENST00000534493 1895 ntTSL 2 BASIC18.77■□□□□ 0.6
RFC4P35249 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
RFC4P35249 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
RFC4P35249 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC18.77■□□□□ 0.59
RFC4P35249 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
RFC4P35249 PRAL-201ENST00000624952 3286 ntBASIC18.76■□□□□ 0.59
RFC4P35249 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RFC4P35249 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC18.76■□□□□ 0.59
RFC4P35249 CYP4F23P-201ENST00000593402 1579 ntBASIC18.76■□□□□ 0.59
RFC4P35249 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RFC4P35249 KRT18P9-201ENST00000604826 1300 ntBASIC18.76■□□□□ 0.59
RFC4P35249 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RFC4P35249 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RFC4P35249 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RFC4P35249 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RFC4P35249 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC18.76■□□□□ 0.59
RFC4P35249 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC18.76■□□□□ 0.59
RFC4P35249 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
RFC4P35249 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RFC4P35249 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
RFC4P35249 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC18.76■□□□□ 0.59
RFC4P35249 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RFC4P35249 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RFC4P35249 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RFC4P35249 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
RFC4P35249 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RFC4P35249 LINC01165-201ENST00000445190 1623 ntBASIC18.76■□□□□ 0.59
RFC4P35249 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RFC4P35249 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RFC4P35249 MBP-201ENST00000354542 575 ntTSL 2 BASIC18.76■□□□□ 0.59
RFC4P35249 Z69890.1-201ENST00000382990 339 ntBASIC18.76■□□□□ 0.59
RFC4P35249 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RFC4P35249 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RFC4P35249 AL627422.1-201ENST00000434104 580 ntBASIC18.76■□□□□ 0.59
RFC4P35249 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC18.76■□□□□ 0.59
RFC4P35249 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC18.76■□□□□ 0.59
RFC4P35249 AL645933.1-201ENST00000440087 609 ntBASIC18.76■□□□□ 0.59
RFC4P35249 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RFC4P35249 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC18.76■□□□□ 0.59
RFC4P35249 AC093752.3-201ENST00000567343 901 ntBASIC18.76■□□□□ 0.59
RFC4P35249 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC18.76■□□□□ 0.59
RFC4P35249 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC18.76■□□□□ 0.59
RFC4P35249 BX088702.1-201ENST00000610784 235 ntBASIC18.76■□□□□ 0.59
RFC4P35249 MIR6756-201ENST00000616240 63 ntBASIC18.76■□□□□ 0.59
RFC4P35249 AC133540.1-201ENST00000620845 1019 ntBASIC18.76■□□□□ 0.59
RFC4P35249 AC105250.1-201ENST00000509378 2057 ntBASIC18.76■□□□□ 0.59
RFC4P35249 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RFC4P35249 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC18.76■□□□□ 0.59
RFC4P35249 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC18.76■□□□□ 0.59
RFC4P35249 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
RFC4P35249 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC18.76■□□□□ 0.59
RFC4P35249 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RFC4P35249 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC18.76■□□□□ 0.59
RFC4P35249 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RFC4P35249 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RFC4P35249 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms