Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TNFSF4P23510 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
TNFSF4P23510 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.33
TNFSF4P23510 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
TNFSF4P23510 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TNFSF4P23510 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.33
TNFSF4P23510 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC13.02□□□□□ -0.33
TNFSF4P23510 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
TNFSF4P23510 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC13.02□□□□□ -0.33
TNFSF4P23510 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
TNFSF4P23510 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TNFSF4P23510 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.33
TNFSF4P23510 CICP11-201ENST00000434745 2827 ntBASIC13.02□□□□□ -0.33
TNFSF4P23510 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC13.02□□□□□ -0.33
TNFSF4P23510 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
TNFSF4P23510 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC13.02□□□□□ -0.33
TNFSF4P23510 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
TNFSF4P23510 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
TNFSF4P23510 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TNFSF4P23510 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TNFSF4P23510 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC13.02□□□□□ -0.33
TNFSF4P23510 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
TNFSF4P23510 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC13.02□□□□□ -0.33
TNFSF4P23510 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC13.02□□□□□ -0.33
TNFSF4P23510 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TNFSF4P23510 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC13.01□□□□□ -0.33
TNFSF4P23510 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
TNFSF4P23510 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TNFSF4P23510 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
TNFSF4P23510 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TNFSF4P23510 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TNFSF4P23510 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
TNFSF4P23510 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TNFSF4P23510 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
TNFSF4P23510 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
TNFSF4P23510 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TNFSF4P23510 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
TNFSF4P23510 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TNFSF4P23510 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
TNFSF4P23510 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
TNFSF4P23510 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TNFSF4P23510 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TNFSF4P23510 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
TNFSF4P23510 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC13.01□□□□□ -0.33
TNFSF4P23510 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TNFSF4P23510 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TNFSF4P23510 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
TNFSF4P23510 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TNFSF4P23510 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
TNFSF4P23510 FUZ-207ENST00000526575 482 ntTSL 4 BASIC13.01□□□□□ -0.33
TNFSF4P23510 CLUHP6-201ENST00000580789 941 ntBASIC13.01□□□□□ -0.33
TNFSF4P23510 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC13.01□□□□□ -0.33
TNFSF4P23510 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC13.01□□□□□ -0.33
TNFSF4P23510 AC239800.4-201ENST00000603712 296 ntBASIC13.01□□□□□ -0.33
TNFSF4P23510 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TNFSF4P23510 AC134312.5-201ENST00000568031 1313 ntBASIC13.01□□□□□ -0.33
TNFSF4P23510 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TNFSF4P23510 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TNFSF4P23510 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TNFSF4P23510 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
TNFSF4P23510 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
TNFSF4P23510 AL158070.2-201ENST00000623713 1621 ntBASIC13.01□□□□□ -0.33
TNFSF4P23510 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
TNFSF4P23510 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TNFSF4P23510 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
TNFSF4P23510 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC13.01□□□□□ -0.33
TNFSF4P23510 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TNFSF4P23510 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC13.01□□□□□ -0.33
TNFSF4P23510 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
TNFSF4P23510 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
TNFSF4P23510 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC13.01□□□□□ -0.33
TNFSF4P23510 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TNFSF4P23510 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TNFSF4P23510 DBET-201ENST00000630918 3363 ntBASIC13.01□□□□□ -0.33
TNFSF4P23510 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TNFSF4P23510 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
TNFSF4P23510 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
TNFSF4P23510 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
TNFSF4P23510 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
TNFSF4P23510 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
TNFSF4P23510 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
TNFSF4P23510 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TNFSF4P23510 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
TNFSF4P23510 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
TNFSF4P23510 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC13□□□□□ -0.33
TNFSF4P23510 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TNFSF4P23510 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC13□□□□□ -0.33
TNFSF4P23510 GSN-206ENST00000394353 2311 ntTSL 2 BASIC13□□□□□ -0.33
TNFSF4P23510 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC13□□□□□ -0.33
TNFSF4P23510 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC13□□□□□ -0.33
TNFSF4P23510 AC023024.2-201ENST00000623561 1993 ntBASIC13□□□□□ -0.33
TNFSF4P23510 AC112693.3-201ENST00000624819 1983 ntBASIC13□□□□□ -0.33
TNFSF4P23510 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC13□□□□□ -0.33
TNFSF4P23510 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
TNFSF4P23510 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TNFSF4P23510 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC13□□□□□ -0.33
TNFSF4P23510 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC13□□□□□ -0.33
TNFSF4P23510 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TNFSF4P23510 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC13□□□□□ -0.33
TNFSF4P23510 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms