Protein–RNA interactions for Protein: Q9UQP3

TNN, Tenascin-N, humanhuman

Predictions only

Length 1,299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNNQ9UQP3 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TNNQ9UQP3 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TNNQ9UQP3 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC19.18■□□□□ 0.66
TNNQ9UQP3 ACKR1-201ENST00000368121 1240 ntBASIC19.18■□□□□ 0.66
TNNQ9UQP3 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TNNQ9UQP3 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TNNQ9UQP3 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC19.18■□□□□ 0.66
TNNQ9UQP3 NUS1P3-201ENST00000423502 862 ntBASIC19.18■□□□□ 0.66
TNNQ9UQP3 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC19.18■□□□□ 0.66
TNNQ9UQP3 TAF8-206ENST00000472818 719 ntTSL 2 BASIC19.18■□□□□ 0.66
TNNQ9UQP3 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC19.18■□□□□ 0.66
TNNQ9UQP3 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC19.18■□□□□ 0.66
TNNQ9UQP3 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC19.18■□□□□ 0.66
TNNQ9UQP3 AL354702.1-201ENST00000442006 1960 ntBASIC19.18■□□□□ 0.66
TNNQ9UQP3 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC19.18■□□□□ 0.66
TNNQ9UQP3 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TNNQ9UQP3 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TNNQ9UQP3 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
TNNQ9UQP3 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TNNQ9UQP3 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TNNQ9UQP3 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
TNNQ9UQP3 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
TNNQ9UQP3 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
TNNQ9UQP3 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC19.18■□□□□ 0.66
TNNQ9UQP3 AC018665.1-201ENST00000622927 1362 ntBASIC19.18■□□□□ 0.66
TNNQ9UQP3 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TNNQ9UQP3 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TNNQ9UQP3 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TNNQ9UQP3 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TNNQ9UQP3 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
TNNQ9UQP3 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TNNQ9UQP3 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TNNQ9UQP3 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
TNNQ9UQP3 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TNNQ9UQP3 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC19.17■□□□□ 0.66
TNNQ9UQP3 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TNNQ9UQP3 LRRC59-203ENST00000576448 1531 ntBASIC19.17■□□□□ 0.66
TNNQ9UQP3 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
TNNQ9UQP3 RPS15-201ENST00000233609 534 ntTSL 2 BASIC19.17■□□□□ 0.66
TNNQ9UQP3 RN7SKP230-201ENST00000365642 335 ntBASIC19.17■□□□□ 0.66
TNNQ9UQP3 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC19.17■□□□□ 0.66
TNNQ9UQP3 PGGT1BP2-201ENST00000398621 1028 ntBASIC19.17■□□□□ 0.66
TNNQ9UQP3 POM121L8P-201ENST00000417732 1281 ntBASIC19.17■□□□□ 0.66
TNNQ9UQP3 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC19.17■□□□□ 0.66
TNNQ9UQP3 POM121L9P-203ENST00000441984 1285 ntBASIC19.17■□□□□ 0.66
TNNQ9UQP3 AL590640.2-201ENST00000457038 527 ntBASIC19.17■□□□□ 0.66
TNNQ9UQP3 AP003171.2-201ENST00000528208 925 ntBASIC19.17■□□□□ 0.66
TNNQ9UQP3 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC19.17■□□□□ 0.66
TNNQ9UQP3 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
TNNQ9UQP3 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC19.17■□□□□ 0.66
TNNQ9UQP3 RPS15-205ENST00000586686 562 ntTSL 5 BASIC19.17■□□□□ 0.66
TNNQ9UQP3 RPS15-208ENST00000591804 711 ntTSL 5 BASIC19.17■□□□□ 0.66
TNNQ9UQP3 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
TNNQ9UQP3 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC19.17■□□□□ 0.66
TNNQ9UQP3 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TNNQ9UQP3 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC19.17■□□□□ 0.66
TNNQ9UQP3 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TNNQ9UQP3 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
TNNQ9UQP3 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
TNNQ9UQP3 TP73-213ENST00000604479 1623 ntTSL 5 BASIC19.17■□□□□ 0.66
TNNQ9UQP3 BX640514.1-201ENST00000583223 1918 ntBASIC19.17■□□□□ 0.66
TNNQ9UQP3 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC19.17■□□□□ 0.66
TNNQ9UQP3 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TNNQ9UQP3 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TNNQ9UQP3 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TNNQ9UQP3 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TNNQ9UQP3 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC19.17■□□□□ 0.66
TNNQ9UQP3 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TNNQ9UQP3 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC19.16■□□□□ 0.66
TNNQ9UQP3 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC19.16■□□□□ 0.66
TNNQ9UQP3 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TNNQ9UQP3 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TNNQ9UQP3 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TNNQ9UQP3 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TNNQ9UQP3 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
TNNQ9UQP3 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC19.16■□□□□ 0.66
TNNQ9UQP3 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
TNNQ9UQP3 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
TNNQ9UQP3 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
TNNQ9UQP3 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TNNQ9UQP3 BCRP2-202ENST00000447763 634 ntBASIC19.16■□□□□ 0.66
TNNQ9UQP3 AL391280.1-201ENST00000506969 1062 ntBASIC19.16■□□□□ 0.66
TNNQ9UQP3 BCRP6-201ENST00000510112 632 ntBASIC19.16■□□□□ 0.66
TNNQ9UQP3 BCRP7-201ENST00000511549 544 ntBASIC19.16■□□□□ 0.66
TNNQ9UQP3 FUZ-207ENST00000526575 482 ntTSL 4 BASIC19.16■□□□□ 0.66
TNNQ9UQP3 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
TNNQ9UQP3 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TNNQ9UQP3 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
TNNQ9UQP3 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC19.16■□□□□ 0.66
TNNQ9UQP3 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC19.16■□□□□ 0.66
TNNQ9UQP3 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TNNQ9UQP3 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TNNQ9UQP3 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TNNQ9UQP3 AC009093.2-202ENST00000620513 2079 ntBASIC19.16■□□□□ 0.66
TNNQ9UQP3 CLUHP2-201ENST00000426660 1303 ntBASIC19.16■□□□□ 0.66
TNNQ9UQP3 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC19.16■□□□□ 0.66
TNNQ9UQP3 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TNNQ9UQP3 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TNNQ9UQP3 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TNNQ9UQP3 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms