Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC14.41□□□□□ -0.1
COL21A1Q96P44 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
COL21A1Q96P44 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
COL21A1Q96P44 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC14.41□□□□□ -0.1
COL21A1Q96P44 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
COL21A1Q96P44 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC14.41□□□□□ -0.1
COL21A1Q96P44 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
COL21A1Q96P44 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
COL21A1Q96P44 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
COL21A1Q96P44 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
COL21A1Q96P44 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
COL21A1Q96P44 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC14.41□□□□□ -0.1
COL21A1Q96P44 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC14.41□□□□□ -0.1
COL21A1Q96P44 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC14.41□□□□□ -0.1
COL21A1Q96P44 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
COL21A1Q96P44 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC14.41□□□□□ -0.1
COL21A1Q96P44 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
COL21A1Q96P44 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
COL21A1Q96P44 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC14.41□□□□□ -0.1
COL21A1Q96P44 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
COL21A1Q96P44 AL121723.1-201ENST00000445194 1519 ntBASIC14.41□□□□□ -0.1
COL21A1Q96P44 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
COL21A1Q96P44 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
COL21A1Q96P44 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
COL21A1Q96P44 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
COL21A1Q96P44 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC14.4□□□□□ -0.1
COL21A1Q96P44 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC14.4□□□□□ -0.1
COL21A1Q96P44 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
COL21A1Q96P44 ACE3P-201ENST00000423435 1973 ntBASIC14.4□□□□□ -0.1
COL21A1Q96P44 PCDHGB8P-201ENST00000502926 1973 ntBASIC14.4□□□□□ -0.1
COL21A1Q96P44 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC14.4□□□□□ -0.1
COL21A1Q96P44 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
COL21A1Q96P44 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
COL21A1Q96P44 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
COL21A1Q96P44 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
COL21A1Q96P44 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
COL21A1Q96P44 AC007541.1-201ENST00000570282 1469 ntBASIC14.4□□□□□ -0.1
COL21A1Q96P44 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
COL21A1Q96P44 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
COL21A1Q96P44 RERG-209ENST00000546331 1383 ntTSL 2 BASIC14.4□□□□□ -0.1
COL21A1Q96P44 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
COL21A1Q96P44 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
COL21A1Q96P44 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
COL21A1Q96P44 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
COL21A1Q96P44 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
COL21A1Q96P44 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
COL21A1Q96P44 GHSR-202ENST00000427970 912 ntBASIC14.4□□□□□ -0.1
COL21A1Q96P44 DFFBP1-201ENST00000433250 979 ntBASIC14.4□□□□□ -0.1
COL21A1Q96P44 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC14.4□□□□□ -0.1
COL21A1Q96P44 RHOA-206ENST00000454011 889 ntTSL 2 BASIC14.4□□□□□ -0.1
COL21A1Q96P44 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC14.4□□□□□ -0.1
COL21A1Q96P44 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC14.4□□□□□ -0.1
COL21A1Q96P44 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC14.4□□□□□ -0.1
COL21A1Q96P44 AC055876.2-201ENST00000531834 546 ntBASIC14.4□□□□□ -0.1
COL21A1Q96P44 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC14.4□□□□□ -0.1
COL21A1Q96P44 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC14.4□□□□□ -0.1
COL21A1Q96P44 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC14.4□□□□□ -0.1
COL21A1Q96P44 UBL5-208ENST00000593087 320 ntTSL 3 BASIC14.4□□□□□ -0.1
COL21A1Q96P44 YTHDF3-AS1-201ENST00000603538 718 ntBASIC14.4□□□□□ -0.1
COL21A1Q96P44 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC14.4□□□□□ -0.1
COL21A1Q96P44 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC14.4□□□□□ -0.1
COL21A1Q96P44 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC14.4□□□□□ -0.1
COL21A1Q96P44 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
COL21A1Q96P44 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC14.4□□□□□ -0.1
COL21A1Q96P44 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC14.4□□□□□ -0.1
COL21A1Q96P44 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
COL21A1Q96P44 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
COL21A1Q96P44 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC14.4□□□□□ -0.1
COL21A1Q96P44 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
COL21A1Q96P44 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
COL21A1Q96P44 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
COL21A1Q96P44 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
COL21A1Q96P44 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
COL21A1Q96P44 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
COL21A1Q96P44 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
COL21A1Q96P44 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC14.4□□□□□ -0.1
COL21A1Q96P44 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
COL21A1Q96P44 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
COL21A1Q96P44 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
COL21A1Q96P44 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
COL21A1Q96P44 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC14.39□□□□□ -0.11
COL21A1Q96P44 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
COL21A1Q96P44 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
COL21A1Q96P44 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC14.39□□□□□ -0.11
COL21A1Q96P44 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
COL21A1Q96P44 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC14.39□□□□□ -0.11
COL21A1Q96P44 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
COL21A1Q96P44 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
COL21A1Q96P44 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
COL21A1Q96P44 GOLGA6L11P-201ENST00000417252 1298 ntBASIC14.39□□□□□ -0.11
COL21A1Q96P44 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC14.39□□□□□ -0.11
COL21A1Q96P44 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
COL21A1Q96P44 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC14.39□□□□□ -0.11
COL21A1Q96P44 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC14.39□□□□□ -0.11
COL21A1Q96P44 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
COL21A1Q96P44 RRP7BP-205ENST00000566851 833 ntBASIC14.39□□□□□ -0.11
COL21A1Q96P44 AC036164.1-201ENST00000570544 333 ntBASIC14.39□□□□□ -0.11
COL21A1Q96P44 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC14.39□□□□□ -0.11
COL21A1Q96P44 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
COL21A1Q96P44 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms