Protein–RNA interactions for Protein: Q96M43

NBPF4, Neuroblastoma breakpoint family member 4, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF4Q96M43 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
NBPF4Q96M43 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NBPF4Q96M43 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC19.7■□□□□ 0.74
NBPF4Q96M43 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
NBPF4Q96M43 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
NBPF4Q96M43 IGF1-203ENST00000392904 761 ntTSL 5 BASIC19.7■□□□□ 0.74
NBPF4Q96M43 AC078875.1-201ENST00000431907 724 ntBASIC19.7■□□□□ 0.74
NBPF4Q96M43 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC19.7■□□□□ 0.74
NBPF4Q96M43 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC19.7■□□□□ 0.74
NBPF4Q96M43 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC19.7■□□□□ 0.74
NBPF4Q96M43 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
NBPF4Q96M43 GCOM2-201ENST00000509133 1104 ntBASIC19.7■□□□□ 0.74
NBPF4Q96M43 IGLV3-15-201ENST00000518356 244 ntBASIC19.7■□□□□ 0.74
NBPF4Q96M43 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC19.7■□□□□ 0.74
NBPF4Q96M43 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC19.7■□□□□ 0.74
NBPF4Q96M43 AC131206.1-201ENST00000538078 1211 ntBASIC19.7■□□□□ 0.74
NBPF4Q96M43 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC19.7■□□□□ 0.74
NBPF4Q96M43 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC19.7■□□□□ 0.74
NBPF4Q96M43 AC009884.2-201ENST00000603110 324 ntBASIC19.7■□□□□ 0.74
NBPF4Q96M43 AC073352.2-201ENST00000609385 439 ntBASIC19.7■□□□□ 0.74
NBPF4Q96M43 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
NBPF4Q96M43 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NBPF4Q96M43 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC19.7■□□□□ 0.74
NBPF4Q96M43 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC19.7■□□□□ 0.74
NBPF4Q96M43 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
NBPF4Q96M43 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NBPF4Q96M43 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC19.7■□□□□ 0.74
NBPF4Q96M43 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
NBPF4Q96M43 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NBPF4Q96M43 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
NBPF4Q96M43 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NBPF4Q96M43 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
NBPF4Q96M43 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC19.7■□□□□ 0.74
NBPF4Q96M43 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
NBPF4Q96M43 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NBPF4Q96M43 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
NBPF4Q96M43 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
NBPF4Q96M43 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC19.7■□□□□ 0.74
NBPF4Q96M43 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NBPF4Q96M43 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NBPF4Q96M43 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
NBPF4Q96M43 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
NBPF4Q96M43 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NBPF4Q96M43 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NBPF4Q96M43 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NBPF4Q96M43 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NBPF4Q96M43 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NBPF4Q96M43 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC19.69■□□□□ 0.74
NBPF4Q96M43 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NBPF4Q96M43 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC19.69■□□□□ 0.74
NBPF4Q96M43 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
NBPF4Q96M43 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
NBPF4Q96M43 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
NBPF4Q96M43 LY6E-208ENST00000520531 490 ntTSL 2 BASIC19.69■□□□□ 0.74
NBPF4Q96M43 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC19.69■□□□□ 0.74
NBPF4Q96M43 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC19.69■□□□□ 0.74
NBPF4Q96M43 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NBPF4Q96M43 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC19.69■□□□□ 0.74
NBPF4Q96M43 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NBPF4Q96M43 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NBPF4Q96M43 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC19.69■□□□□ 0.74
NBPF4Q96M43 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
NBPF4Q96M43 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NBPF4Q96M43 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC19.69■□□□□ 0.74
NBPF4Q96M43 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NBPF4Q96M43 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
NBPF4Q96M43 AC007292.2-201ENST00000593524 1812 ntBASIC19.69■□□□□ 0.74
NBPF4Q96M43 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NBPF4Q96M43 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NBPF4Q96M43 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NBPF4Q96M43 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
NBPF4Q96M43 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC19.69■□□□□ 0.74
NBPF4Q96M43 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NBPF4Q96M43 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NBPF4Q96M43 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NBPF4Q96M43 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC19.68■□□□□ 0.74
NBPF4Q96M43 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC19.68■□□□□ 0.74
NBPF4Q96M43 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
NBPF4Q96M43 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC19.68■□□□□ 0.74
NBPF4Q96M43 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC19.68■□□□□ 0.74
NBPF4Q96M43 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
NBPF4Q96M43 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
NBPF4Q96M43 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NBPF4Q96M43 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
NBPF4Q96M43 FGFR3P1-201ENST00000449999 601 ntBASIC19.68■□□□□ 0.74
NBPF4Q96M43 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
NBPF4Q96M43 AC019193.1-201ENST00000506678 823 ntBASIC19.68■□□□□ 0.74
NBPF4Q96M43 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC19.68■□□□□ 0.74
NBPF4Q96M43 WDR7-208ENST00000589935 544 ntTSL 4 BASIC19.68■□□□□ 0.74
NBPF4Q96M43 IRF3-215ENST00000596822 823 ntTSL 3 BASIC19.68■□□□□ 0.74
NBPF4Q96M43 AL157813.1-201ENST00000612996 587 ntBASIC19.68■□□□□ 0.74
NBPF4Q96M43 MIR7845-201ENST00000618396 99 ntBASIC19.68■□□□□ 0.74
NBPF4Q96M43 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
NBPF4Q96M43 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC19.68■□□□□ 0.74
NBPF4Q96M43 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NBPF4Q96M43 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC19.68■□□□□ 0.74
NBPF4Q96M43 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC19.68■□□□□ 0.74
NBPF4Q96M43 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
NBPF4Q96M43 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC19.68■□□□□ 0.74
NBPF4Q96M43 AC144522.1-201ENST00000625111 1658 ntBASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms