Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
CHMP6Q96FZ7 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC15.35■□□□□ 0.05
CHMP6Q96FZ7 AL591122.2-201ENST00000624125 1853 ntBASIC15.35■□□□□ 0.05
CHMP6Q96FZ7 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CHMP6Q96FZ7 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CHMP6Q96FZ7 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CHMP6Q96FZ7 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CHMP6Q96FZ7 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CHMP6Q96FZ7 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CHMP6Q96FZ7 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
CHMP6Q96FZ7 NUTM2HP-201ENST00000442076 2498 ntBASIC15.35■□□□□ 0.05
CHMP6Q96FZ7 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
CHMP6Q96FZ7 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CHMP6Q96FZ7 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CHMP6Q96FZ7 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC15.35■□□□□ 0.05
CHMP6Q96FZ7 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CHMP6Q96FZ7 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CHMP6Q96FZ7 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC15.35■□□□□ 0.05
CHMP6Q96FZ7 AC136604.1-201ENST00000418535 575 ntBASIC15.35■□□□□ 0.05
CHMP6Q96FZ7 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CHMP6Q96FZ7 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC15.35■□□□□ 0.05
CHMP6Q96FZ7 FDX1P1-201ENST00000449115 551 ntBASIC15.35■□□□□ 0.05
CHMP6Q96FZ7 TMEM198B-204ENST00000484016 896 ntBASIC15.35■□□□□ 0.05
CHMP6Q96FZ7 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC15.35■□□□□ 0.05
CHMP6Q96FZ7 SLC25A1P1-201ENST00000528351 927 ntBASIC15.35■□□□□ 0.05
CHMP6Q96FZ7 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC15.35■□□□□ 0.05
CHMP6Q96FZ7 KRT19P2-202ENST00000557173 1012 ntBASIC15.35■□□□□ 0.05
CHMP6Q96FZ7 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC15.35■□□□□ 0.05
CHMP6Q96FZ7 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC15.35■□□□□ 0.05
CHMP6Q96FZ7 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC15.35■□□□□ 0.05
CHMP6Q96FZ7 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
CHMP6Q96FZ7 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC15.35■□□□□ 0.05
CHMP6Q96FZ7 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
CHMP6Q96FZ7 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CHMP6Q96FZ7 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
CHMP6Q96FZ7 KRT8P24-201ENST00000560290 1559 ntBASIC15.35■□□□□ 0.05
CHMP6Q96FZ7 CYP4F24P-201ENST00000586049 1580 ntBASIC15.35■□□□□ 0.05
CHMP6Q96FZ7 AC007787.1-201ENST00000588095 1583 ntBASIC15.35■□□□□ 0.05
CHMP6Q96FZ7 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CHMP6Q96FZ7 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CHMP6Q96FZ7 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC15.35■□□□□ 0.05
CHMP6Q96FZ7 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
CHMP6Q96FZ7 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
CHMP6Q96FZ7 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
CHMP6Q96FZ7 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC15.34■□□□□ 0.05
CHMP6Q96FZ7 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CHMP6Q96FZ7 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CHMP6Q96FZ7 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC15.34■□□□□ 0.05
CHMP6Q96FZ7 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CHMP6Q96FZ7 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC15.34■□□□□ 0.05
CHMP6Q96FZ7 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC15.34■□□□□ 0.05
CHMP6Q96FZ7 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
CHMP6Q96FZ7 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CHMP6Q96FZ7 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC15.34■□□□□ 0.05
CHMP6Q96FZ7 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CHMP6Q96FZ7 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CHMP6Q96FZ7 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC15.34■□□□□ 0.05
CHMP6Q96FZ7 KRT18P2-201ENST00000447938 1258 ntBASIC15.34■□□□□ 0.05
CHMP6Q96FZ7 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CHMP6Q96FZ7 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC15.34■□□□□ 0.05
CHMP6Q96FZ7 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC15.34■□□□□ 0.05
CHMP6Q96FZ7 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC15.34■□□□□ 0.05
CHMP6Q96FZ7 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC15.34■□□□□ 0.05
CHMP6Q96FZ7 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC15.34■□□□□ 0.05
CHMP6Q96FZ7 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC15.34■□□□□ 0.05
CHMP6Q96FZ7 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CHMP6Q96FZ7 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC15.34■□□□□ 0.05
CHMP6Q96FZ7 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC15.34■□□□□ 0.05
CHMP6Q96FZ7 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC15.34■□□□□ 0.05
CHMP6Q96FZ7 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CHMP6Q96FZ7 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CHMP6Q96FZ7 AC015909.5-201ENST00000624336 2266 ntBASIC15.34■□□□□ 0.05
CHMP6Q96FZ7 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CHMP6Q96FZ7 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CHMP6Q96FZ7 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
CHMP6Q96FZ7 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC15.34■□□□□ 0.05
CHMP6Q96FZ7 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CHMP6Q96FZ7 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
CHMP6Q96FZ7 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CHMP6Q96FZ7 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
CHMP6Q96FZ7 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC15.34■□□□□ 0.05
CHMP6Q96FZ7 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.05
CHMP6Q96FZ7 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CHMP6Q96FZ7 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC15.34■□□□□ 0.05
CHMP6Q96FZ7 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC15.33■□□□□ 0.05
CHMP6Q96FZ7 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CHMP6Q96FZ7 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CHMP6Q96FZ7 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC15.33■□□□□ 0.05
CHMP6Q96FZ7 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CHMP6Q96FZ7 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC15.33■□□□□ 0.05
CHMP6Q96FZ7 REXO1L4P-201ENST00000605109 1937 ntBASIC15.33■□□□□ 0.05
CHMP6Q96FZ7 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.05
CHMP6Q96FZ7 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CHMP6Q96FZ7 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.05
CHMP6Q96FZ7 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
CHMP6Q96FZ7 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC15.33■□□□□ 0.04
CHMP6Q96FZ7 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC15.33■□□□□ 0.04
CHMP6Q96FZ7 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
CHMP6Q96FZ7 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC15.33■□□□□ 0.04
CHMP6Q96FZ7 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms