Protein–RNA interactions for Protein: Q92834

RPGR, X-linked retinitis pigmentosa GTPase regulator, humanhuman

Known RBP Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRQ92834 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
RPGRQ92834 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC18.5■□□□□ 0.55
RPGRQ92834 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC18.5■□□□□ 0.55
RPGRQ92834 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC18.5■□□□□ 0.55
RPGRQ92834 PAM16-211ENST00000575848 518 ntTSL 3 BASIC18.5■□□□□ 0.55
RPGRQ92834 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
RPGRQ92834 NAT9-211ENST00000580632 799 ntTSL 3 BASIC18.5■□□□□ 0.55
RPGRQ92834 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RPGRQ92834 AP003419.4-201ENST00000616071 517 ntBASIC18.5■□□□□ 0.55
RPGRQ92834 AC103691.2-201ENST00000618824 433 ntBASIC18.5■□□□□ 0.55
RPGRQ92834 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
RPGRQ92834 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
RPGRQ92834 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
RPGRQ92834 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RPGRQ92834 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RPGRQ92834 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RPGRQ92834 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RPGRQ92834 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RPGRQ92834 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC18.5■□□□□ 0.55
RPGRQ92834 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC18.5■□□□□ 0.55
RPGRQ92834 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC18.5■□□□□ 0.55
RPGRQ92834 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
RPGRQ92834 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RPGRQ92834 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
RPGRQ92834 PRORSD1P-202ENST00000563365 2154 ntBASIC18.49■□□□□ 0.55
RPGRQ92834 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RPGRQ92834 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
RPGRQ92834 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RPGRQ92834 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC18.49■□□□□ 0.55
RPGRQ92834 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
RPGRQ92834 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RPGRQ92834 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC18.49■□□□□ 0.55
RPGRQ92834 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC18.49■□□□□ 0.55
RPGRQ92834 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RPGRQ92834 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RPGRQ92834 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC18.49■□□□□ 0.55
RPGRQ92834 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RPGRQ92834 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RPGRQ92834 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RPGRQ92834 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
RPGRQ92834 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC18.49■□□□□ 0.55
RPGRQ92834 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC18.49■□□□□ 0.55
RPGRQ92834 SKA2-202ENST00000437036 625 ntTSL 2 BASIC18.49■□□□□ 0.55
RPGRQ92834 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC18.49■□□□□ 0.55
RPGRQ92834 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RPGRQ92834 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
RPGRQ92834 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RPGRQ92834 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC18.49■□□□□ 0.55
RPGRQ92834 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
RPGRQ92834 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC18.49■□□□□ 0.55
RPGRQ92834 AC073352.2-201ENST00000609385 439 ntBASIC18.49■□□□□ 0.55
RPGRQ92834 MIR6720-201ENST00000611664 98 ntBASIC18.49■□□□□ 0.55
RPGRQ92834 COX6A1P2-201ENST00000620597 330 ntBASIC18.49■□□□□ 0.55
RPGRQ92834 Z98259.2-201ENST00000641583 609 ntBASIC18.49■□□□□ 0.55
RPGRQ92834 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RPGRQ92834 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC18.49■□□□□ 0.55
RPGRQ92834 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC18.49■□□□□ 0.55
RPGRQ92834 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
RPGRQ92834 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RPGRQ92834 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RPGRQ92834 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC18.49■□□□□ 0.55
RPGRQ92834 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC18.49■□□□□ 0.55
RPGRQ92834 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
RPGRQ92834 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RPGRQ92834 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RPGRQ92834 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC18.49■□□□□ 0.55
RPGRQ92834 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RPGRQ92834 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RPGRQ92834 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
RPGRQ92834 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
RPGRQ92834 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
RPGRQ92834 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC18.49■□□□□ 0.55
RPGRQ92834 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RPGRQ92834 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
RPGRQ92834 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
RPGRQ92834 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
RPGRQ92834 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
RPGRQ92834 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RPGRQ92834 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RPGRQ92834 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
RPGRQ92834 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
RPGRQ92834 AC239868.1-201ENST00000369385 493 ntBASIC18.48■□□□□ 0.55
RPGRQ92834 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RPGRQ92834 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RPGRQ92834 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RPGRQ92834 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC18.48■□□□□ 0.55
RPGRQ92834 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC18.48■□□□□ 0.55
RPGRQ92834 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC18.48■□□□□ 0.55
RPGRQ92834 AC104784.1-201ENST00000473096 294 ntBASIC18.48■□□□□ 0.55
RPGRQ92834 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC18.48■□□□□ 0.55
RPGRQ92834 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RPGRQ92834 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
RPGRQ92834 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
RPGRQ92834 MIR4750-201ENST00000584564 56 ntBASIC18.48■□□□□ 0.55
RPGRQ92834 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC18.48■□□□□ 0.55
RPGRQ92834 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC18.48■□□□□ 0.55
RPGRQ92834 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC18.48■□□□□ 0.55
RPGRQ92834 AC090616.6-203ENST00000579186 1945 ntBASIC18.48■□□□□ 0.55
RPGRQ92834 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
RPGRQ92834 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 63 ms