Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC16.51■□□□□ 0.23
VPS52Q8N1B4 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
VPS52Q8N1B4 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
VPS52Q8N1B4 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC16.51■□□□□ 0.23
VPS52Q8N1B4 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
VPS52Q8N1B4 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
VPS52Q8N1B4 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
VPS52Q8N1B4 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
VPS52Q8N1B4 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC16.5■□□□□ 0.23
VPS52Q8N1B4 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
VPS52Q8N1B4 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
VPS52Q8N1B4 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
VPS52Q8N1B4 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
VPS52Q8N1B4 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
VPS52Q8N1B4 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
VPS52Q8N1B4 AGER-203ENST00000375065 665 ntTSL 2 BASIC16.5■□□□□ 0.23
VPS52Q8N1B4 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
VPS52Q8N1B4 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
VPS52Q8N1B4 BTBD6P1-201ENST00000412176 1267 ntBASIC16.5■□□□□ 0.23
VPS52Q8N1B4 AC104306.2-201ENST00000451877 341 ntBASIC16.5■□□□□ 0.23
VPS52Q8N1B4 AL590640.2-201ENST00000457038 527 ntBASIC16.5■□□□□ 0.23
VPS52Q8N1B4 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
VPS52Q8N1B4 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC16.5■□□□□ 0.23
VPS52Q8N1B4 RNA5SP486-201ENST00000515961 83 ntBASIC16.5■□□□□ 0.23
VPS52Q8N1B4 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC16.5■□□□□ 0.23
VPS52Q8N1B4 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC16.5■□□□□ 0.23
VPS52Q8N1B4 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC16.5■□□□□ 0.23
VPS52Q8N1B4 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC16.5■□□□□ 0.23
VPS52Q8N1B4 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
VPS52Q8N1B4 PRKN-211ENST00000615065 261 ntTSL 5 BASIC16.5■□□□□ 0.23
VPS52Q8N1B4 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC16.5■□□□□ 0.23
VPS52Q8N1B4 AC073347.1-201ENST00000421633 2643 ntBASIC16.5■□□□□ 0.23
VPS52Q8N1B4 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
VPS52Q8N1B4 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
VPS52Q8N1B4 FOS-202ENST00000535987 1402 ntTSL 2 BASIC16.5■□□□□ 0.23
VPS52Q8N1B4 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
VPS52Q8N1B4 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC16.5■□□□□ 0.23
VPS52Q8N1B4 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
VPS52Q8N1B4 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
VPS52Q8N1B4 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
VPS52Q8N1B4 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
VPS52Q8N1B4 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
VPS52Q8N1B4 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
VPS52Q8N1B4 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
VPS52Q8N1B4 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
VPS52Q8N1B4 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
VPS52Q8N1B4 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
VPS52Q8N1B4 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC16.49■□□□□ 0.23
VPS52Q8N1B4 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC16.49■□□□□ 0.23
VPS52Q8N1B4 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
VPS52Q8N1B4 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC16.49■□□□□ 0.23
VPS52Q8N1B4 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
VPS52Q8N1B4 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
VPS52Q8N1B4 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC16.49■□□□□ 0.23
VPS52Q8N1B4 DKFZP434H168-201ENST00000567381 1905 ntBASIC16.49■□□□□ 0.23
VPS52Q8N1B4 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
VPS52Q8N1B4 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
VPS52Q8N1B4 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
VPS52Q8N1B4 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
VPS52Q8N1B4 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC16.49■□□□□ 0.23
VPS52Q8N1B4 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
VPS52Q8N1B4 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
VPS52Q8N1B4 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
VPS52Q8N1B4 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
VPS52Q8N1B4 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
VPS52Q8N1B4 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
VPS52Q8N1B4 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
VPS52Q8N1B4 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
VPS52Q8N1B4 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC16.49■□□□□ 0.23
VPS52Q8N1B4 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
VPS52Q8N1B4 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
VPS52Q8N1B4 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC16.49■□□□□ 0.23
VPS52Q8N1B4 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC16.49■□□□□ 0.23
VPS52Q8N1B4 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
VPS52Q8N1B4 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
VPS52Q8N1B4 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
VPS52Q8N1B4 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
VPS52Q8N1B4 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC16.49■□□□□ 0.23
VPS52Q8N1B4 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
VPS52Q8N1B4 AP001258.2-201ENST00000529891 490 ntBASIC16.49■□□□□ 0.23
VPS52Q8N1B4 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
VPS52Q8N1B4 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
VPS52Q8N1B4 KLK3-211ENST00000597483 810 ntTSL 2 BASIC16.49■□□□□ 0.23
VPS52Q8N1B4 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC16.49■□□□□ 0.23
VPS52Q8N1B4 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC16.49■□□□□ 0.23
VPS52Q8N1B4 GPR39-203ENST00000622084 900 ntTSL 5 BASIC16.49■□□□□ 0.23
VPS52Q8N1B4 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
VPS52Q8N1B4 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
VPS52Q8N1B4 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
VPS52Q8N1B4 OR2I1P-209ENST00000641730 5365 ntBASIC16.49■□□□□ 0.23
VPS52Q8N1B4 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
VPS52Q8N1B4 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
VPS52Q8N1B4 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
VPS52Q8N1B4 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC16.49■□□□□ 0.23
VPS52Q8N1B4 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC16.49■□□□□ 0.23
VPS52Q8N1B4 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
VPS52Q8N1B4 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
VPS52Q8N1B4 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC16.48■□□□□ 0.23
VPS52Q8N1B4 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
VPS52Q8N1B4 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms