Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
RAB43Q86YS6 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC14.59□□□□□ -0.07
RAB43Q86YS6 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RAB43Q86YS6 SP100-205ENST00000409824 1802 ntTSL 5 BASIC14.59□□□□□ -0.07
RAB43Q86YS6 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC14.59□□□□□ -0.07
RAB43Q86YS6 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
RAB43Q86YS6 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
RAB43Q86YS6 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC14.59□□□□□ -0.07
RAB43Q86YS6 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
RAB43Q86YS6 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RAB43Q86YS6 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
RAB43Q86YS6 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
RAB43Q86YS6 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
RAB43Q86YS6 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
RAB43Q86YS6 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC14.59□□□□□ -0.07
RAB43Q86YS6 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RAB43Q86YS6 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RAB43Q86YS6 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC14.59□□□□□ -0.07
RAB43Q86YS6 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RAB43Q86YS6 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
RAB43Q86YS6 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
RAB43Q86YS6 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC14.59□□□□□ -0.07
RAB43Q86YS6 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
RAB43Q86YS6 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
RAB43Q86YS6 RAC2-202ENST00000401529 569 ntTSL 4 BASIC14.59□□□□□ -0.07
RAB43Q86YS6 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC14.59□□□□□ -0.07
RAB43Q86YS6 AC012441.1-201ENST00000446669 685 ntBASIC14.59□□□□□ -0.07
RAB43Q86YS6 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
RAB43Q86YS6 BNIP3P42-201ENST00000454982 569 ntBASIC14.59□□□□□ -0.07
RAB43Q86YS6 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC14.59□□□□□ -0.07
RAB43Q86YS6 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC14.59□□□□□ -0.07
RAB43Q86YS6 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC14.59□□□□□ -0.07
RAB43Q86YS6 CLUHP6-201ENST00000580789 941 ntBASIC14.59□□□□□ -0.07
RAB43Q86YS6 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC14.59□□□□□ -0.07
RAB43Q86YS6 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC14.59□□□□□ -0.07
RAB43Q86YS6 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC14.59□□□□□ -0.07
RAB43Q86YS6 BNIP3P29-201ENST00000598302 571 ntBASIC14.59□□□□□ -0.07
RAB43Q86YS6 AC011447.5-201ENST00000616168 564 ntBASIC14.59□□□□□ -0.07
RAB43Q86YS6 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RAB43Q86YS6 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC14.59□□□□□ -0.07
RAB43Q86YS6 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RAB43Q86YS6 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
RAB43Q86YS6 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC14.59□□□□□ -0.07
RAB43Q86YS6 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
RAB43Q86YS6 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC14.59□□□□□ -0.07
RAB43Q86YS6 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
RAB43Q86YS6 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RAB43Q86YS6 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
RAB43Q86YS6 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
RAB43Q86YS6 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
RAB43Q86YS6 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
RAB43Q86YS6 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC14.58□□□□□ -0.07
RAB43Q86YS6 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC14.58□□□□□ -0.07
RAB43Q86YS6 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC14.58□□□□□ -0.07
RAB43Q86YS6 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.07
RAB43Q86YS6 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.07
RAB43Q86YS6 PPP1R26P4-201ENST00000619065 3527 ntBASIC14.58□□□□□ -0.07
RAB43Q86YS6 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
RAB43Q86YS6 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC14.58□□□□□ -0.07
RAB43Q86YS6 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC14.58□□□□□ -0.08
RAB43Q86YS6 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RAB43Q86YS6 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RAB43Q86YS6 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
RAB43Q86YS6 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC14.58□□□□□ -0.08
RAB43Q86YS6 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
RAB43Q86YS6 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC14.58□□□□□ -0.08
RAB43Q86YS6 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
RAB43Q86YS6 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
RAB43Q86YS6 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC14.58□□□□□ -0.08
RAB43Q86YS6 BRF1-202ENST00000379932 884 ntTSL 5 BASIC14.58□□□□□ -0.08
RAB43Q86YS6 GZMB-202ENST00000382540 816 ntTSL 5 BASIC14.58□□□□□ -0.08
RAB43Q86YS6 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RAB43Q86YS6 SUN1-204ENST00000403868 978 ntTSL 2 BASIC14.58□□□□□ -0.08
RAB43Q86YS6 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
RAB43Q86YS6 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC14.58□□□□□ -0.08
RAB43Q86YS6 FAM21FP-201ENST00000426241 1131 ntBASIC14.58□□□□□ -0.08
RAB43Q86YS6 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
RAB43Q86YS6 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC14.58□□□□□ -0.08
RAB43Q86YS6 RPL7P3-201ENST00000441388 714 ntBASIC14.58□□□□□ -0.08
RAB43Q86YS6 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC14.58□□□□□ -0.08
RAB43Q86YS6 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC14.58□□□□□ -0.08
RAB43Q86YS6 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC14.58□□□□□ -0.08
RAB43Q86YS6 AC026410.3-201ENST00000514280 936 ntBASIC14.58□□□□□ -0.08
RAB43Q86YS6 MFF-223ENST00000524634 647 ntTSL 2 BASIC14.58□□□□□ -0.08
RAB43Q86YS6 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC14.58□□□□□ -0.08
RAB43Q86YS6 AC079316.1-201ENST00000548397 411 ntBASIC14.58□□□□□ -0.08
RAB43Q86YS6 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
RAB43Q86YS6 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC14.58□□□□□ -0.08
RAB43Q86YS6 GPX4-206ENST00000588919 803 ntTSL 2 BASIC14.58□□□□□ -0.08
RAB43Q86YS6 ATF5-205ENST00000600336 682 ntTSL 2 BASIC14.58□□□□□ -0.08
RAB43Q86YS6 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC14.58□□□□□ -0.08
RAB43Q86YS6 HADH-212ENST00000638621 741 ntTSL 5 BASIC14.58□□□□□ -0.08
RAB43Q86YS6 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
RAB43Q86YS6 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
RAB43Q86YS6 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC14.58□□□□□ -0.08
RAB43Q86YS6 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
RAB43Q86YS6 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
RAB43Q86YS6 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
RAB43Q86YS6 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC14.58□□□□□ -0.08
RAB43Q86YS6 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 62.2 ms