Protein–RNA interactions for Protein: Q86WJ1

CHD1L, Chromodomain-helicase-DNA-binding protein 1-like, humanhuman

Predictions only

Length 897 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1LQ86WJ1 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CHD1LQ86WJ1 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CHD1LQ86WJ1 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
CHD1LQ86WJ1 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC18.71■□□□□ 0.59
CHD1LQ86WJ1 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC18.71■□□□□ 0.59
CHD1LQ86WJ1 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC18.71■□□□□ 0.59
CHD1LQ86WJ1 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
CHD1LQ86WJ1 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.58
CHD1LQ86WJ1 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC18.7■□□□□ 0.58
CHD1LQ86WJ1 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHD1LQ86WJ1 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHD1LQ86WJ1 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC18.7■□□□□ 0.58
CHD1LQ86WJ1 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC18.7■□□□□ 0.58
CHD1LQ86WJ1 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
CHD1LQ86WJ1 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHD1LQ86WJ1 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHD1LQ86WJ1 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC18.7■□□□□ 0.58
CHD1LQ86WJ1 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CHD1LQ86WJ1 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CHD1LQ86WJ1 TSPY16P-201ENST00000449843 468 ntBASIC18.7■□□□□ 0.58
CHD1LQ86WJ1 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CHD1LQ86WJ1 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CHD1LQ86WJ1 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC18.7■□□□□ 0.58
CHD1LQ86WJ1 AC026434.2-201ENST00000506094 1078 ntBASIC18.7■□□□□ 0.58
CHD1LQ86WJ1 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CHD1LQ86WJ1 AC015802.1-201ENST00000588104 1449 ntBASIC18.7■□□□□ 0.58
CHD1LQ86WJ1 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC18.7■□□□□ 0.58
CHD1LQ86WJ1 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC18.7■□□□□ 0.58
CHD1LQ86WJ1 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC18.7■□□□□ 0.58
CHD1LQ86WJ1 AJ011932.1-201ENST00000621707 465 ntBASIC18.7■□□□□ 0.58
CHD1LQ86WJ1 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
CHD1LQ86WJ1 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC18.7■□□□□ 0.58
CHD1LQ86WJ1 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC18.7■□□□□ 0.58
CHD1LQ86WJ1 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC18.7■□□□□ 0.58
CHD1LQ86WJ1 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CHD1LQ86WJ1 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC18.7■□□□□ 0.58
CHD1LQ86WJ1 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CHD1LQ86WJ1 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC18.7■□□□□ 0.58
CHD1LQ86WJ1 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHD1LQ86WJ1 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHD1LQ86WJ1 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHD1LQ86WJ1 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC18.69■□□□□ 0.58
CHD1LQ86WJ1 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CHD1LQ86WJ1 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHD1LQ86WJ1 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC18.69■□□□□ 0.58
CHD1LQ86WJ1 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CHD1LQ86WJ1 AL391825.1-201ENST00000457671 1364 ntBASIC18.69■□□□□ 0.58
CHD1LQ86WJ1 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC18.69■□□□□ 0.58
CHD1LQ86WJ1 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHD1LQ86WJ1 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
CHD1LQ86WJ1 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
CHD1LQ86WJ1 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC18.69■□□□□ 0.58
CHD1LQ86WJ1 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CHD1LQ86WJ1 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CHD1LQ86WJ1 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHD1LQ86WJ1 KLF2P2-201ENST00000416807 1039 ntBASIC18.69■□□□□ 0.58
CHD1LQ86WJ1 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC18.69■□□□□ 0.58
CHD1LQ86WJ1 SOCS2P1-201ENST00000417727 557 ntBASIC18.69■□□□□ 0.58
CHD1LQ86WJ1 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC18.69■□□□□ 0.58
CHD1LQ86WJ1 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC18.69■□□□□ 0.58
CHD1LQ86WJ1 AC114812.1-204ENST00000449669 728 ntBASIC18.69■□□□□ 0.58
CHD1LQ86WJ1 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC18.69■□□□□ 0.58
CHD1LQ86WJ1 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC18.69■□□□□ 0.58
CHD1LQ86WJ1 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CHD1LQ86WJ1 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC18.69■□□□□ 0.58
CHD1LQ86WJ1 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC18.69■□□□□ 0.58
CHD1LQ86WJ1 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CHD1LQ86WJ1 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHD1LQ86WJ1 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC18.69■□□□□ 0.58
CHD1LQ86WJ1 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC18.69■□□□□ 0.58
CHD1LQ86WJ1 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHD1LQ86WJ1 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC18.69■□□□□ 0.58
CHD1LQ86WJ1 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CHD1LQ86WJ1 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHD1LQ86WJ1 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC18.69■□□□□ 0.58
CHD1LQ86WJ1 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC18.69■□□□□ 0.58
CHD1LQ86WJ1 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CHD1LQ86WJ1 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHD1LQ86WJ1 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
CHD1LQ86WJ1 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHD1LQ86WJ1 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHD1LQ86WJ1 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC18.68■□□□□ 0.58
CHD1LQ86WJ1 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC18.68■□□□□ 0.58
CHD1LQ86WJ1 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHD1LQ86WJ1 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CHD1LQ86WJ1 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC18.68■□□□□ 0.58
CHD1LQ86WJ1 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC18.68■□□□□ 0.58
CHD1LQ86WJ1 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHD1LQ86WJ1 EIF3FP3-201ENST00000434851 1086 ntBASIC18.68■□□□□ 0.58
CHD1LQ86WJ1 MYCLP2-201ENST00000449268 967 ntBASIC18.68■□□□□ 0.58
CHD1LQ86WJ1 AC022616.1-201ENST00000518688 554 ntBASIC18.68■□□□□ 0.58
CHD1LQ86WJ1 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
CHD1LQ86WJ1 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC18.68■□□□□ 0.58
CHD1LQ86WJ1 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC18.68■□□□□ 0.58
CHD1LQ86WJ1 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
CHD1LQ86WJ1 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC18.68■□□□□ 0.58
CHD1LQ86WJ1 AC005252.2-201ENST00000624630 1141 ntBASIC18.68■□□□□ 0.58
CHD1LQ86WJ1 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHD1LQ86WJ1 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
CHD1LQ86WJ1 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms