Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 AL139094.1-201ENST00000405549 1188 ntBASIC18.14■□□□□ 0.49
RNF20Q5VTR2 AC098850.1-201ENST00000419919 790 ntBASIC18.14■□□□□ 0.49
RNF20Q5VTR2 CDK4-206ENST00000549606 558 ntTSL 2 BASIC18.14■□□□□ 0.49
RNF20Q5VTR2 IFT20-206ENST00000578122 834 ntTSL 2 BASIC18.14■□□□□ 0.49
RNF20Q5VTR2 IFT20-208ENST00000578985 831 ntTSL 3 BASIC18.14■□□□□ 0.49
RNF20Q5VTR2 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC18.14■□□□□ 0.49
RNF20Q5VTR2 SPDYE22P-201ENST00000582158 798 ntBASIC18.14■□□□□ 0.49
RNF20Q5VTR2 CHCHD2P3-201ENST00000603038 451 ntBASIC18.14■□□□□ 0.49
RNF20Q5VTR2 AC079416.2-201ENST00000625035 1193 ntBASIC18.14■□□□□ 0.49
RNF20Q5VTR2 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RNF20Q5VTR2 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC18.14■□□□□ 0.49
RNF20Q5VTR2 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
RNF20Q5VTR2 AC018442.1-201ENST00000421439 2061 ntBASIC18.14■□□□□ 0.49
RNF20Q5VTR2 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RNF20Q5VTR2 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RNF20Q5VTR2 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC18.14■□□□□ 0.49
RNF20Q5VTR2 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RNF20Q5VTR2 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RNF20Q5VTR2 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RNF20Q5VTR2 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RNF20Q5VTR2 AGER-206ENST00000375070 1463 ntTSL 5 BASIC18.14■□□□□ 0.49
RNF20Q5VTR2 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RNF20Q5VTR2 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RNF20Q5VTR2 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RNF20Q5VTR2 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RNF20Q5VTR2 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC18.13■□□□□ 0.49
RNF20Q5VTR2 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RNF20Q5VTR2 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
RNF20Q5VTR2 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RNF20Q5VTR2 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
RNF20Q5VTR2 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
RNF20Q5VTR2 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC18.13■□□□□ 0.49
RNF20Q5VTR2 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RNF20Q5VTR2 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC18.13■□□□□ 0.49
RNF20Q5VTR2 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
RNF20Q5VTR2 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RNF20Q5VTR2 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RNF20Q5VTR2 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
RNF20Q5VTR2 MIR661-201ENST00000384842 89 ntBASIC18.13■□□□□ 0.49
RNF20Q5VTR2 AC236430.1-201ENST00000402231 743 ntBASIC18.13■□□□□ 0.49
RNF20Q5VTR2 PIN1P1-201ENST00000412108 996 ntBASIC18.13■□□□□ 0.49
RNF20Q5VTR2 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC18.13■□□□□ 0.49
RNF20Q5VTR2 AC002472.2-201ENST00000442739 958 ntBASIC18.13■□□□□ 0.49
RNF20Q5VTR2 AC114812.1-204ENST00000449669 728 ntBASIC18.13■□□□□ 0.49
RNF20Q5VTR2 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC18.13■□□□□ 0.49
RNF20Q5VTR2 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RNF20Q5VTR2 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC18.13■□□□□ 0.49
RNF20Q5VTR2 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC18.13■□□□□ 0.49
RNF20Q5VTR2 API5-211ENST00000534695 560 ntTSL 5 BASIC18.13■□□□□ 0.49
RNF20Q5VTR2 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
RNF20Q5VTR2 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC18.13■□□□□ 0.49
RNF20Q5VTR2 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC18.13■□□□□ 0.49
RNF20Q5VTR2 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RNF20Q5VTR2 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC18.13■□□□□ 0.49
RNF20Q5VTR2 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC18.13■□□□□ 0.49
RNF20Q5VTR2 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RNF20Q5VTR2 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC18.13■□□□□ 0.49
RNF20Q5VTR2 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC18.13■□□□□ 0.49
RNF20Q5VTR2 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
RNF20Q5VTR2 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
RNF20Q5VTR2 KRT8P14-201ENST00000414254 1442 ntBASIC18.13■□□□□ 0.49
RNF20Q5VTR2 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RNF20Q5VTR2 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RNF20Q5VTR2 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RNF20Q5VTR2 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC18.13■□□□□ 0.49
RNF20Q5VTR2 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RNF20Q5VTR2 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC18.13■□□□□ 0.49
RNF20Q5VTR2 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RNF20Q5VTR2 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RNF20Q5VTR2 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RNF20Q5VTR2 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC18.13■□□□□ 0.49
RNF20Q5VTR2 AC007686.3-201ENST00000619017 3487 ntBASIC18.13■□□□□ 0.49
RNF20Q5VTR2 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RNF20Q5VTR2 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
RNF20Q5VTR2 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC18.12■□□□□ 0.49
RNF20Q5VTR2 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
RNF20Q5VTR2 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC18.12■□□□□ 0.49
RNF20Q5VTR2 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
RNF20Q5VTR2 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RNF20Q5VTR2 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RNF20Q5VTR2 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RNF20Q5VTR2 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC18.12■□□□□ 0.49
RNF20Q5VTR2 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC18.12■□□□□ 0.49
RNF20Q5VTR2 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RNF20Q5VTR2 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RNF20Q5VTR2 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
RNF20Q5VTR2 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
RNF20Q5VTR2 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
RNF20Q5VTR2 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
RNF20Q5VTR2 GALT-202ENST00000450095 1280 ntTSL 2 BASIC18.12■□□□□ 0.49
RNF20Q5VTR2 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC18.12■□□□□ 0.49
RNF20Q5VTR2 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC18.12■□□□□ 0.49
RNF20Q5VTR2 OARD1-208ENST00000469104 704 ntTSL 2 BASIC18.12■□□□□ 0.49
RNF20Q5VTR2 HNRNPA1P13-201ENST00000510646 963 ntBASIC18.12■□□□□ 0.49
RNF20Q5VTR2 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC18.12■□□□□ 0.49
RNF20Q5VTR2 ENPP7P5-201ENST00000541031 1031 ntBASIC18.12■□□□□ 0.49
RNF20Q5VTR2 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC18.12■□□□□ 0.49
RNF20Q5VTR2 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC18.12■□□□□ 0.49
RNF20Q5VTR2 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC18.12■□□□□ 0.49
RNF20Q5VTR2 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms