Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
ATPAF1Q5TC12 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC13.25□□□□□ -0.29
ATPAF1Q5TC12 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
ATPAF1Q5TC12 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC13.25□□□□□ -0.29
ATPAF1Q5TC12 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC13.25□□□□□ -0.29
ATPAF1Q5TC12 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC13.25□□□□□ -0.29
ATPAF1Q5TC12 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
ATPAF1Q5TC12 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
ATPAF1Q5TC12 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC13.25□□□□□ -0.29
ATPAF1Q5TC12 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
ATPAF1Q5TC12 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
ATPAF1Q5TC12 HNRNPA3P1-201ENST00000401429 1139 ntBASIC13.25□□□□□ -0.29
ATPAF1Q5TC12 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC13.25□□□□□ -0.29
ATPAF1Q5TC12 AC009477.1-201ENST00000452936 217 ntBASIC13.25□□□□□ -0.29
ATPAF1Q5TC12 HNRNPA3P5-201ENST00000455201 833 ntBASIC13.25□□□□□ -0.29
ATPAF1Q5TC12 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC13.25□□□□□ -0.29
ATPAF1Q5TC12 AC004890.2-204ENST00000481968 304 ntBASIC13.25□□□□□ -0.29
ATPAF1Q5TC12 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
ATPAF1Q5TC12 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC13.25□□□□□ -0.29
ATPAF1Q5TC12 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC13.25□□□□□ -0.29
ATPAF1Q5TC12 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
ATPAF1Q5TC12 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC13.25□□□□□ -0.29
ATPAF1Q5TC12 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC13.25□□□□□ -0.29
ATPAF1Q5TC12 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC13.25□□□□□ -0.29
ATPAF1Q5TC12 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC13.25□□□□□ -0.29
ATPAF1Q5TC12 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC13.25□□□□□ -0.29
ATPAF1Q5TC12 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC13.25□□□□□ -0.29
ATPAF1Q5TC12 AC025048.3-201ENST00000590609 569 ntBASIC13.25□□□□□ -0.29
ATPAF1Q5TC12 AC005498.2-205ENST00000593218 784 ntBASIC13.25□□□□□ -0.29
ATPAF1Q5TC12 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
ATPAF1Q5TC12 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC13.25□□□□□ -0.29
ATPAF1Q5TC12 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC13.25□□□□□ -0.29
ATPAF1Q5TC12 AC005702.4-201ENST00000618393 416 ntBASIC13.25□□□□□ -0.29
ATPAF1Q5TC12 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
ATPAF1Q5TC12 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC13.25□□□□□ -0.29
ATPAF1Q5TC12 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ATPAF1Q5TC12 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
ATPAF1Q5TC12 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
ATPAF1Q5TC12 AL928921.2-201ENST00000641325 2442 ntBASIC13.25□□□□□ -0.29
ATPAF1Q5TC12 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ATPAF1Q5TC12 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
ATPAF1Q5TC12 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ATPAF1Q5TC12 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ATPAF1Q5TC12 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
ATPAF1Q5TC12 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC13.25□□□□□ -0.29
ATPAF1Q5TC12 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
ATPAF1Q5TC12 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
ATPAF1Q5TC12 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC13.25□□□□□ -0.29
ATPAF1Q5TC12 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
ATPAF1Q5TC12 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC13.25□□□□□ -0.29
ATPAF1Q5TC12 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC13.25□□□□□ -0.29
ATPAF1Q5TC12 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
ATPAF1Q5TC12 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ATPAF1Q5TC12 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ATPAF1Q5TC12 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
ATPAF1Q5TC12 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
ATPAF1Q5TC12 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
ATPAF1Q5TC12 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ATPAF1Q5TC12 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ATPAF1Q5TC12 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ATPAF1Q5TC12 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
ATPAF1Q5TC12 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
ATPAF1Q5TC12 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
ATPAF1Q5TC12 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ATPAF1Q5TC12 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
ATPAF1Q5TC12 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC13.24□□□□□ -0.29
ATPAF1Q5TC12 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
ATPAF1Q5TC12 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ATPAF1Q5TC12 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
ATPAF1Q5TC12 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ATPAF1Q5TC12 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC13.24□□□□□ -0.29
ATPAF1Q5TC12 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC13.24□□□□□ -0.29
ATPAF1Q5TC12 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC13.24□□□□□ -0.29
ATPAF1Q5TC12 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ATPAF1Q5TC12 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
ATPAF1Q5TC12 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
ATPAF1Q5TC12 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
ATPAF1Q5TC12 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
ATPAF1Q5TC12 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC13.24□□□□□ -0.29
ATPAF1Q5TC12 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC13.24□□□□□ -0.29
ATPAF1Q5TC12 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC13.24□□□□□ -0.29
ATPAF1Q5TC12 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC13.24□□□□□ -0.29
ATPAF1Q5TC12 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC13.24□□□□□ -0.29
ATPAF1Q5TC12 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC13.24□□□□□ -0.29
ATPAF1Q5TC12 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC13.24□□□□□ -0.29
ATPAF1Q5TC12 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC13.24□□□□□ -0.29
ATPAF1Q5TC12 AL512638.1-201ENST00000457493 794 ntBASIC13.24□□□□□ -0.29
ATPAF1Q5TC12 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
ATPAF1Q5TC12 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC13.24□□□□□ -0.29
ATPAF1Q5TC12 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC13.24□□□□□ -0.29
ATPAF1Q5TC12 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC13.24□□□□□ -0.29
ATPAF1Q5TC12 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC13.24□□□□□ -0.29
ATPAF1Q5TC12 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC13.24□□□□□ -0.29
ATPAF1Q5TC12 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ATPAF1Q5TC12 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC13.24□□□□□ -0.29
ATPAF1Q5TC12 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC13.24□□□□□ -0.29
ATPAF1Q5TC12 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC13.24□□□□□ -0.29
ATPAF1Q5TC12 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC13.24□□□□□ -0.29
ATPAF1Q5TC12 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC13.24□□□□□ -0.29
ATPAF1Q5TC12 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms