Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PCDH1Q08174 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC14.66□□□□□ -0.06
PCDH1Q08174 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
PCDH1Q08174 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PCDH1Q08174 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PCDH1Q08174 GRK6P1-201ENST00000400595 1711 ntBASIC14.66□□□□□ -0.06
PCDH1Q08174 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PCDH1Q08174 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
PCDH1Q08174 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PCDH1Q08174 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PCDH1Q08174 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
PCDH1Q08174 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PCDH1Q08174 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
PCDH1Q08174 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
PCDH1Q08174 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PCDH1Q08174 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PCDH1Q08174 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
PCDH1Q08174 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
PCDH1Q08174 REXO1L5P-201ENST00000622260 2098 ntBASIC14.65□□□□□ -0.06
PCDH1Q08174 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
PCDH1Q08174 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC14.65□□□□□ -0.06
PCDH1Q08174 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC14.65□□□□□ -0.06
PCDH1Q08174 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PCDH1Q08174 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC14.65□□□□□ -0.06
PCDH1Q08174 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC14.65□□□□□ -0.06
PCDH1Q08174 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC14.65□□□□□ -0.06
PCDH1Q08174 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
PCDH1Q08174 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PCDH1Q08174 AC007541.1-201ENST00000570282 1469 ntBASIC14.65□□□□□ -0.06
PCDH1Q08174 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC14.65□□□□□ -0.06
PCDH1Q08174 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
PCDH1Q08174 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
PCDH1Q08174 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
PCDH1Q08174 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
PCDH1Q08174 SOCS2P1-201ENST00000417727 557 ntBASIC14.65□□□□□ -0.06
PCDH1Q08174 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
PCDH1Q08174 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PCDH1Q08174 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC14.65□□□□□ -0.06
PCDH1Q08174 AL359711.2-201ENST00000563105 872 ntBASIC14.65□□□□□ -0.06
PCDH1Q08174 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC14.65□□□□□ -0.06
PCDH1Q08174 AL132655.2-201ENST00000596276 594 ntBASIC14.65□□□□□ -0.06
PCDH1Q08174 LINC02560-201ENST00000596379 459 ntBASIC14.65□□□□□ -0.06
PCDH1Q08174 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC14.65□□□□□ -0.06
PCDH1Q08174 AC092364.2-202ENST00000597012 1073 ntBASIC14.65□□□□□ -0.06
PCDH1Q08174 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC14.65□□□□□ -0.06
PCDH1Q08174 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
PCDH1Q08174 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC14.65□□□□□ -0.06
PCDH1Q08174 AC232323.1-201ENST00000540724 2099 ntBASIC14.65□□□□□ -0.06
PCDH1Q08174 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC14.65□□□□□ -0.06
PCDH1Q08174 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
PCDH1Q08174 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
PCDH1Q08174 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
PCDH1Q08174 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
PCDH1Q08174 PES1-204ENST00000402284 2144 ntTSL 5 BASIC14.65□□□□□ -0.06
PCDH1Q08174 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
PCDH1Q08174 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC14.65□□□□□ -0.07
PCDH1Q08174 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
PCDH1Q08174 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
PCDH1Q08174 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PCDH1Q08174 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
PCDH1Q08174 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PCDH1Q08174 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PCDH1Q08174 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
PCDH1Q08174 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC14.64□□□□□ -0.07
PCDH1Q08174 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC14.64□□□□□ -0.07
PCDH1Q08174 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC14.64□□□□□ -0.07
PCDH1Q08174 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PCDH1Q08174 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
PCDH1Q08174 AL137783.1-201ENST00000623494 1896 ntBASIC14.64□□□□□ -0.07
PCDH1Q08174 RPS15-201ENST00000233609 534 ntTSL 2 BASIC14.64□□□□□ -0.07
PCDH1Q08174 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
PCDH1Q08174 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
PCDH1Q08174 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
PCDH1Q08174 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
PCDH1Q08174 GALT-202ENST00000450095 1280 ntTSL 2 BASIC14.64□□□□□ -0.07
PCDH1Q08174 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC14.64□□□□□ -0.07
PCDH1Q08174 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC14.64□□□□□ -0.07
PCDH1Q08174 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PCDH1Q08174 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC14.64□□□□□ -0.07
PCDH1Q08174 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
PCDH1Q08174 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC14.64□□□□□ -0.07
PCDH1Q08174 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC14.64□□□□□ -0.07
PCDH1Q08174 RPS15-205ENST00000586686 562 ntTSL 5 BASIC14.64□□□□□ -0.07
PCDH1Q08174 RPS15-208ENST00000591804 711 ntTSL 5 BASIC14.64□□□□□ -0.07
PCDH1Q08174 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
PCDH1Q08174 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC14.64□□□□□ -0.07
PCDH1Q08174 AP005019.2-201ENST00000615104 511 ntBASIC14.64□□□□□ -0.07
PCDH1Q08174 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
PCDH1Q08174 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
PCDH1Q08174 MPI-203ENST00000535694 1523 ntTSL 2 BASIC14.64□□□□□ -0.07
PCDH1Q08174 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
PCDH1Q08174 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
PCDH1Q08174 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PCDH1Q08174 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC14.64□□□□□ -0.07
PCDH1Q08174 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC14.64□□□□□ -0.07
PCDH1Q08174 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC14.64□□□□□ -0.07
PCDH1Q08174 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
PCDH1Q08174 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
PCDH1Q08174 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
PCDH1Q08174 SBF1P1-201ENST00000444527 5631 ntBASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms