Protein–RNA interactions for Protein: Q04323

UBXN1, UBX domain-containing protein 1, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1Q04323 AC004967.1-201ENST00000453589 447 ntBASIC16.67■□□□□ 0.26
UBXN1Q04323 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
UBXN1Q04323 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
UBXN1Q04323 AC004066.1-201ENST00000502488 802 ntBASIC16.67■□□□□ 0.26
UBXN1Q04323 LY6E-204ENST00000519546 971 ntTSL 2 BASIC16.67■□□□□ 0.26
UBXN1Q04323 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC16.67■□□□□ 0.26
UBXN1Q04323 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC16.67■□□□□ 0.26
UBXN1Q04323 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC16.67■□□□□ 0.26
UBXN1Q04323 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC16.67■□□□□ 0.26
UBXN1Q04323 MPI-209ENST00000564003 1195 ntTSL 2 BASIC16.67■□□□□ 0.26
UBXN1Q04323 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC16.67■□□□□ 0.26
UBXN1Q04323 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC16.67■□□□□ 0.26
UBXN1Q04323 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC16.67■□□□□ 0.26
UBXN1Q04323 INO80C-210ENST00000590757 595 ntTSL 2 BASIC16.67■□□□□ 0.26
UBXN1Q04323 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
UBXN1Q04323 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC16.67■□□□□ 0.26
UBXN1Q04323 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
UBXN1Q04323 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
UBXN1Q04323 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
UBXN1Q04323 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
UBXN1Q04323 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
UBXN1Q04323 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
UBXN1Q04323 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC16.67■□□□□ 0.26
UBXN1Q04323 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
UBXN1Q04323 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
UBXN1Q04323 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
UBXN1Q04323 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
UBXN1Q04323 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
UBXN1Q04323 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
UBXN1Q04323 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
UBXN1Q04323 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
UBXN1Q04323 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC16.66■□□□□ 0.26
UBXN1Q04323 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
UBXN1Q04323 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
UBXN1Q04323 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
UBXN1Q04323 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
UBXN1Q04323 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
UBXN1Q04323 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
UBXN1Q04323 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
UBXN1Q04323 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
UBXN1Q04323 BAD-202ENST00000394531 631 ntTSL 3 BASIC16.66■□□□□ 0.26
UBXN1Q04323 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
UBXN1Q04323 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC16.66■□□□□ 0.26
UBXN1Q04323 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC16.66■□□□□ 0.26
UBXN1Q04323 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
UBXN1Q04323 DNAJB3-202ENST00000449667 1266 ntBASIC16.66■□□□□ 0.26
UBXN1Q04323 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC16.66■□□□□ 0.26
UBXN1Q04323 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC16.66■□□□□ 0.26
UBXN1Q04323 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC16.66■□□□□ 0.26
UBXN1Q04323 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC16.66■□□□□ 0.26
UBXN1Q04323 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
UBXN1Q04323 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC16.66■□□□□ 0.26
UBXN1Q04323 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC16.66■□□□□ 0.26
UBXN1Q04323 AC005840.4-201ENST00000541242 2494 ntBASIC16.66■□□□□ 0.26
UBXN1Q04323 BAD-207ENST00000544785 525 ntTSL 3 BASIC16.66■□□□□ 0.26
UBXN1Q04323 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
UBXN1Q04323 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
UBXN1Q04323 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC16.66■□□□□ 0.26
UBXN1Q04323 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC16.66■□□□□ 0.26
UBXN1Q04323 AL844908.2-201ENST00000609461 460 ntBASIC16.66■□□□□ 0.26
UBXN1Q04323 TEX48-202ENST00000612244 662 ntTSL 3 BASIC16.66■□□□□ 0.26
UBXN1Q04323 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC16.66■□□□□ 0.26
UBXN1Q04323 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC16.66■□□□□ 0.26
UBXN1Q04323 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
UBXN1Q04323 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
UBXN1Q04323 HSPA7-201ENST00000445535 1927 ntBASIC16.66■□□□□ 0.26
UBXN1Q04323 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
UBXN1Q04323 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC16.66■□□□□ 0.26
UBXN1Q04323 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
UBXN1Q04323 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
UBXN1Q04323 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
UBXN1Q04323 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC16.66■□□□□ 0.26
UBXN1Q04323 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
UBXN1Q04323 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
UBXN1Q04323 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
UBXN1Q04323 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
UBXN1Q04323 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
UBXN1Q04323 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC16.65■□□□□ 0.26
UBXN1Q04323 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
UBXN1Q04323 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
UBXN1Q04323 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC16.65■□□□□ 0.26
UBXN1Q04323 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
UBXN1Q04323 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
UBXN1Q04323 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
UBXN1Q04323 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
UBXN1Q04323 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
UBXN1Q04323 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
UBXN1Q04323 TKT-201ENST00000296289 1931 ntTSL 5 BASIC16.65■□□□□ 0.26
UBXN1Q04323 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
UBXN1Q04323 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC16.65■□□□□ 0.26
UBXN1Q04323 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC16.65■□□□□ 0.26
UBXN1Q04323 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC16.65■□□□□ 0.26
UBXN1Q04323 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC16.65■□□□□ 0.26
UBXN1Q04323 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC16.65■□□□□ 0.26
UBXN1Q04323 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
UBXN1Q04323 RAB35-202ENST00000534951 939 ntTSL 2 BASIC16.65■□□□□ 0.26
UBXN1Q04323 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC16.65■□□□□ 0.26
UBXN1Q04323 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
UBXN1Q04323 AC025678.2-201ENST00000562061 970 ntBASIC16.65■□□□□ 0.26
UBXN1Q04323 AC004449.1-201ENST00000564240 433 ntBASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms