Protein–RNA interactions for Protein: Q01850

CDR2, Cerebellar degeneration-related protein 2, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2Q01850 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC16.2■□□□□ 0.18
CDR2Q01850 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC16.2■□□□□ 0.18
CDR2Q01850 TSPY16P-201ENST00000449843 468 ntBASIC16.2■□□□□ 0.18
CDR2Q01850 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
CDR2Q01850 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CDR2Q01850 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CDR2Q01850 AC092552.1-201ENST00000547243 906 ntBASIC16.2■□□□□ 0.18
CDR2Q01850 AC123567.1-201ENST00000548294 1261 ntBASIC16.2■□□□□ 0.18
CDR2Q01850 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC16.2■□□□□ 0.18
CDR2Q01850 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
CDR2Q01850 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDR2Q01850 AL391825.1-201ENST00000457671 1364 ntBASIC16.2■□□□□ 0.18
CDR2Q01850 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC16.2■□□□□ 0.18
CDR2Q01850 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC16.2■□□□□ 0.18
CDR2Q01850 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CDR2Q01850 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDR2Q01850 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC16.19■□□□□ 0.18
CDR2Q01850 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDR2Q01850 PCDHA3-202ENST00000532566 4594 ntBASIC16.19■□□□□ 0.18
CDR2Q01850 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC16.19■□□□□ 0.18
CDR2Q01850 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDR2Q01850 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
CDR2Q01850 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDR2Q01850 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC16.19■□□□□ 0.18
CDR2Q01850 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDR2Q01850 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CDR2Q01850 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC16.19■□□□□ 0.18
CDR2Q01850 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDR2Q01850 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDR2Q01850 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDR2Q01850 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
CDR2Q01850 AC007541.1-201ENST00000570282 1469 ntBASIC16.19■□□□□ 0.18
CDR2Q01850 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
CDR2Q01850 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CDR2Q01850 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDR2Q01850 AC098850.1-201ENST00000419919 790 ntBASIC16.19■□□□□ 0.18
CDR2Q01850 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC16.19■□□□□ 0.18
CDR2Q01850 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC16.19■□□□□ 0.18
CDR2Q01850 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CDR2Q01850 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC16.19■□□□□ 0.18
CDR2Q01850 GLI4-203ENST00000517468 963 ntTSL 5 BASIC16.19■□□□□ 0.18
CDR2Q01850 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC16.19■□□□□ 0.18
CDR2Q01850 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC16.19■□□□□ 0.18
CDR2Q01850 SPDYE22P-201ENST00000582158 798 ntBASIC16.19■□□□□ 0.18
CDR2Q01850 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC16.19■□□□□ 0.18
CDR2Q01850 AL132655.2-201ENST00000596276 594 ntBASIC16.19■□□□□ 0.18
CDR2Q01850 TK2-221ENST00000620035 5060 ntTSL 2 BASIC16.19■□□□□ 0.18
CDR2Q01850 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CDR2Q01850 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC16.19■□□□□ 0.18
CDR2Q01850 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CDR2Q01850 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
CDR2Q01850 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC16.19■□□□□ 0.18
CDR2Q01850 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
CDR2Q01850 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDR2Q01850 KRT8P22-201ENST00000562317 1415 ntBASIC16.19■□□□□ 0.18
CDR2Q01850 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
CDR2Q01850 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
CDR2Q01850 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDR2Q01850 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDR2Q01850 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDR2Q01850 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDR2Q01850 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDR2Q01850 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
CDR2Q01850 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CDR2Q01850 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CDR2Q01850 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDR2Q01850 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDR2Q01850 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDR2Q01850 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDR2Q01850 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDR2Q01850 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CDR2Q01850 MIR661-201ENST00000384842 89 ntBASIC16.18■□□□□ 0.18
CDR2Q01850 AL139094.1-201ENST00000405549 1188 ntBASIC16.18■□□□□ 0.18
CDR2Q01850 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC16.18■□□□□ 0.18
CDR2Q01850 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC16.18■□□□□ 0.18
CDR2Q01850 FAM207CP-201ENST00000443486 507 ntBASIC16.18■□□□□ 0.18
CDR2Q01850 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC16.18■□□□□ 0.18
CDR2Q01850 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC16.18■□□□□ 0.18
CDR2Q01850 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC16.18■□□□□ 0.18
CDR2Q01850 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC16.18■□□□□ 0.18
CDR2Q01850 AL359711.2-201ENST00000563105 872 ntBASIC16.18■□□□□ 0.18
CDR2Q01850 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC16.18■□□□□ 0.18
CDR2Q01850 TMEM261P1-201ENST00000604899 340 ntBASIC16.18■□□□□ 0.18
CDR2Q01850 AC004233.3-201ENST00000607794 1269 ntBASIC16.18■□□□□ 0.18
CDR2Q01850 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC16.18■□□□□ 0.18
CDR2Q01850 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDR2Q01850 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
CDR2Q01850 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC16.18■□□□□ 0.18
CDR2Q01850 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDR2Q01850 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
CDR2Q01850 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CDR2Q01850 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CDR2Q01850 AC007191.1-201ENST00000623179 2995 ntBASIC16.18■□□□□ 0.18
CDR2Q01850 AC005912.2-201ENST00000619492 2400 ntBASIC16.18■□□□□ 0.18
CDR2Q01850 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
CDR2Q01850 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDR2Q01850 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
CDR2Q01850 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDR2Q01850 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC16.18■□□□□ 0.18
CDR2Q01850 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms