Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 AC007551.1-201ENST00000457394 519 ntBASIC14.16□□□□□ -0.14
PER3P56645 AC108725.1-201ENST00000495472 409 ntBASIC14.16□□□□□ -0.14
PER3P56645 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC14.16□□□□□ -0.14
PER3P56645 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC14.16□□□□□ -0.14
PER3P56645 AP000812.2-201ENST00000538934 718 ntBASIC14.16□□□□□ -0.14
PER3P56645 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC14.16□□□□□ -0.14
PER3P56645 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
PER3P56645 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
PER3P56645 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PER3P56645 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PER3P56645 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC14.16□□□□□ -0.14
PER3P56645 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
PER3P56645 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
PER3P56645 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PER3P56645 BNIP3P1-202ENST00000550043 1585 ntBASIC14.16□□□□□ -0.14
PER3P56645 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
PER3P56645 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC14.16□□□□□ -0.14
PER3P56645 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
PER3P56645 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC14.16□□□□□ -0.14
PER3P56645 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC14.16□□□□□ -0.14
PER3P56645 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
PER3P56645 AC079781.5-202ENST00000641784 3743 ntBASIC14.16□□□□□ -0.14
PER3P56645 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PER3P56645 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
PER3P56645 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
PER3P56645 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PER3P56645 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC14.16□□□□□ -0.14
PER3P56645 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
PER3P56645 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC14.15□□□□□ -0.14
PER3P56645 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
PER3P56645 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
PER3P56645 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC14.15□□□□□ -0.14
PER3P56645 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC14.15□□□□□ -0.14
PER3P56645 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
PER3P56645 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
PER3P56645 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PER3P56645 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
PER3P56645 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC14.15□□□□□ -0.14
PER3P56645 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
PER3P56645 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
PER3P56645 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC14.15□□□□□ -0.14
PER3P56645 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PER3P56645 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
PER3P56645 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PER3P56645 AC006449.6-201ENST00000612330 2296 ntBASIC14.15□□□□□ -0.14
PER3P56645 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC14.15□□□□□ -0.14
PER3P56645 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC14.15□□□□□ -0.14
PER3P56645 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC14.15□□□□□ -0.14
PER3P56645 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC14.15□□□□□ -0.14
PER3P56645 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PER3P56645 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PER3P56645 RERG-209ENST00000546331 1383 ntTSL 2 BASIC14.15□□□□□ -0.14
PER3P56645 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PER3P56645 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC14.15□□□□□ -0.14
PER3P56645 MIR1247-201ENST00000408206 136 ntBASIC14.15□□□□□ -0.14
PER3P56645 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC14.15□□□□□ -0.14
PER3P56645 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PER3P56645 AC016694.1-201ENST00000434179 700 ntBASIC14.15□□□□□ -0.14
PER3P56645 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC14.15□□□□□ -0.14
PER3P56645 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC14.15□□□□□ -0.14
PER3P56645 GOLGA2P4-201ENST00000441462 777 ntBASIC14.15□□□□□ -0.14
PER3P56645 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC14.15□□□□□ -0.14
PER3P56645 FAM86LP-201ENST00000478302 853 ntBASIC14.15□□□□□ -0.14
PER3P56645 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC14.15□□□□□ -0.14
PER3P56645 EMC4-209ENST00000559421 497 ntTSL 2 BASIC14.15□□□□□ -0.14
PER3P56645 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC14.15□□□□□ -0.14
PER3P56645 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC14.15□□□□□ -0.14
PER3P56645 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC14.15□□□□□ -0.14
PER3P56645 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC14.15□□□□□ -0.14
PER3P56645 AL139099.5-201ENST00000635274 300 ntBASIC14.15□□□□□ -0.14
PER3P56645 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PER3P56645 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC14.15□□□□□ -0.14
PER3P56645 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
PER3P56645 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC14.15□□□□□ -0.14
PER3P56645 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PER3P56645 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PER3P56645 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PER3P56645 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PER3P56645 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC14.15□□□□□ -0.14
PER3P56645 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
PER3P56645 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.15
PER3P56645 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
PER3P56645 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC14.14□□□□□ -0.15
PER3P56645 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
PER3P56645 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC14.14□□□□□ -0.15
PER3P56645 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
PER3P56645 PCDHA3-202ENST00000532566 4594 ntBASIC14.14□□□□□ -0.15
PER3P56645 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
PER3P56645 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC14.14□□□□□ -0.15
PER3P56645 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
PER3P56645 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC14.14□□□□□ -0.15
PER3P56645 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
PER3P56645 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
PER3P56645 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
PER3P56645 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
PER3P56645 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC14.14□□□□□ -0.15
PER3P56645 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
PER3P56645 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC14.14□□□□□ -0.15
PER3P56645 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC14.14□□□□□ -0.15
PER3P56645 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms