Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Cdh4P39038 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC11.58□□□□□ -0.56
Cdh4P39038 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC11.58□□□□□ -0.56
Cdh4P39038 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cdh4P39038 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC11.58□□□□□ -0.56
Cdh4P39038 AC093022.1-201ENSMUST00000226949 1072 ntBASIC11.58□□□□□ -0.56
Cdh4P39038 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cdh4P39038 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cdh4P39038 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cdh4P39038 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cdh4P39038 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Cdh4P39038 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cdh4P39038 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cdh4P39038 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cdh4P39038 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cdh4P39038 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Cdh4P39038 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC11.58□□□□□ -0.56
Cdh4P39038 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cdh4P39038 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Cdh4P39038 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cdh4P39038 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cdh4P39038 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cdh4P39038 CT025624.1-201ENSMUST00000224007 2700 ntBASIC11.58□□□□□ -0.56
Cdh4P39038 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Cdh4P39038 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Cdh4P39038 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cdh4P39038 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Cdh4P39038 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Cdh4P39038 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Cdh4P39038 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cdh4P39038 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Cdh4P39038 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Cdh4P39038 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC11.57□□□□□ -0.56
Cdh4P39038 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC11.57□□□□□ -0.56
Cdh4P39038 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cdh4P39038 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cdh4P39038 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cdh4P39038 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
Cdh4P39038 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Cdh4P39038 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Cdh4P39038 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC11.57□□□□□ -0.56
Cdh4P39038 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC11.57□□□□□ -0.56
Cdh4P39038 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cdh4P39038 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Cdh4P39038 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Cdh4P39038 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Cdh4P39038 Ighv1-60-201ENSMUST00000195816 405 ntBASIC11.57□□□□□ -0.56
Cdh4P39038 Gm44711-201ENSMUST00000205414 1264 ntBASIC11.57□□□□□ -0.56
Cdh4P39038 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Cdh4P39038 Gm45224-201ENSMUST00000208203 414 ntBASIC11.57□□□□□ -0.56
Cdh4P39038 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC11.57□□□□□ -0.56
Cdh4P39038 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC11.57□□□□□ -0.56
Cdh4P39038 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cdh4P39038 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC11.57□□□□□ -0.56
Cdh4P39038 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cdh4P39038 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Cdh4P39038 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Cdh4P39038 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cdh4P39038 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Cdh4P39038 AC154671.1-201ENSMUST00000228617 1578 ntBASIC11.57□□□□□ -0.56
Cdh4P39038 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC11.57□□□□□ -0.56
Cdh4P39038 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Cdh4P39038 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Cdh4P39038 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
Cdh4P39038 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cdh4P39038 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Cdh4P39038 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cdh4P39038 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Cdh4P39038 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cdh4P39038 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cdh4P39038 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cdh4P39038 Gm5053-201ENSMUST00000208361 1678 ntBASIC11.56□□□□□ -0.56
Cdh4P39038 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cdh4P39038 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Cdh4P39038 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cdh4P39038 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cdh4P39038 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cdh4P39038 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Cdh4P39038 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cdh4P39038 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC11.56□□□□□ -0.56
Cdh4P39038 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Cdh4P39038 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cdh4P39038 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC11.56□□□□□ -0.56
Cdh4P39038 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Cdh4P39038 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC11.56□□□□□ -0.56
Cdh4P39038 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Cdh4P39038 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Cdh4P39038 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC11.56□□□□□ -0.56
Cdh4P39038 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC11.56□□□□□ -0.56
Cdh4P39038 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cdh4P39038 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
Cdh4P39038 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cdh4P39038 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Cdh4P39038 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cdh4P39038 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Cdh4P39038 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Cdh4P39038 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Cdh4P39038 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Cdh4P39038 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Cdh4P39038 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC11.56□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms