Protein–RNA interactions for Protein: P20309

CHRM3, Muscarinic acetylcholine receptor M3, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRM3P20309 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
CHRM3P20309 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CHRM3P20309 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CHRM3P20309 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC15.17■□□□□ 0.02
CHRM3P20309 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
CHRM3P20309 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CHRM3P20309 AC013726.1-201ENST00000563747 2285 ntBASIC15.17■□□□□ 0.02
CHRM3P20309 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC15.17■□□□□ 0.02
CHRM3P20309 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
CHRM3P20309 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
CHRM3P20309 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CHRM3P20309 LINC01101-201ENST00000622953 1884 ntBASIC15.16■□□□□ 0.02
CHRM3P20309 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CHRM3P20309 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC15.16■□□□□ 0.02
CHRM3P20309 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
CHRM3P20309 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
CHRM3P20309 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CHRM3P20309 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CHRM3P20309 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
CHRM3P20309 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CHRM3P20309 AC139749.1-202ENST00000617529 3139 ntBASIC15.16■□□□□ 0.02
CHRM3P20309 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CHRM3P20309 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CHRM3P20309 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CHRM3P20309 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CHRM3P20309 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC15.16■□□□□ 0.02
CHRM3P20309 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CHRM3P20309 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CHRM3P20309 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CHRM3P20309 GAPDHP40-201ENST00000505218 1006 ntBASIC15.16■□□□□ 0.02
CHRM3P20309 AC026410.3-201ENST00000514280 936 ntBASIC15.16■□□□□ 0.02
CHRM3P20309 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC15.16■□□□□ 0.02
CHRM3P20309 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC15.16■□□□□ 0.02
CHRM3P20309 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC15.16■□□□□ 0.02
CHRM3P20309 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC15.16■□□□□ 0.02
CHRM3P20309 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CHRM3P20309 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CHRM3P20309 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC15.16■□□□□ 0.02
CHRM3P20309 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC15.16■□□□□ 0.02
CHRM3P20309 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
CHRM3P20309 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC15.16■□□□□ 0.02
CHRM3P20309 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CHRM3P20309 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC15.16■□□□□ 0.02
CHRM3P20309 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
CHRM3P20309 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CHRM3P20309 SLC9A7P1-202ENST00000556476 2239 ntBASIC15.16■□□□□ 0.02
CHRM3P20309 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CHRM3P20309 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
CHRM3P20309 FGD5P1-202ENST00000614866 2498 ntBASIC15.16■□□□□ 0.02
CHRM3P20309 AL138799.1-201ENST00000448213 1675 ntBASIC15.16■□□□□ 0.02
CHRM3P20309 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CHRM3P20309 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CHRM3P20309 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CHRM3P20309 AC007787.1-201ENST00000588095 1583 ntBASIC15.15■□□□□ 0.02
CHRM3P20309 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CHRM3P20309 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC15.15■□□□□ 0.02
CHRM3P20309 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CHRM3P20309 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CHRM3P20309 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CHRM3P20309 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
CHRM3P20309 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC15.15■□□□□ 0.02
CHRM3P20309 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
CHRM3P20309 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CHRM3P20309 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC15.15■□□□□ 0.02
CHRM3P20309 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CHRM3P20309 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC15.15■□□□□ 0.02
CHRM3P20309 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
CHRM3P20309 DFFBP1-201ENST00000433250 979 ntBASIC15.15■□□□□ 0.02
CHRM3P20309 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
CHRM3P20309 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CHRM3P20309 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC15.15■□□□□ 0.02
CHRM3P20309 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CHRM3P20309 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CHRM3P20309 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC15.15■□□□□ 0.02
CHRM3P20309 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC15.15■□□□□ 0.02
CHRM3P20309 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC15.15■□□□□ 0.02
CHRM3P20309 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC15.15■□□□□ 0.02
CHRM3P20309 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC15.15■□□□□ 0.02
CHRM3P20309 LINC02560-201ENST00000596379 459 ntBASIC15.15■□□□□ 0.02
CHRM3P20309 AL096865.1-201ENST00000606796 927 ntBASIC15.15■□□□□ 0.02
CHRM3P20309 AC107373.2-201ENST00000607735 490 ntBASIC15.15■□□□□ 0.02
CHRM3P20309 AL662799.1-202ENST00000614205 422 ntBASIC15.15■□□□□ 0.02
CHRM3P20309 MIR8072-201ENST00000614241 80 ntBASIC15.15■□□□□ 0.02
CHRM3P20309 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC15.15■□□□□ 0.02
CHRM3P20309 HFE2-206ENST00000634927 506 ntTSL 4 BASIC15.15■□□□□ 0.02
CHRM3P20309 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CHRM3P20309 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CHRM3P20309 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
CHRM3P20309 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
CHRM3P20309 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CHRM3P20309 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CHRM3P20309 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC15.15■□□□□ 0.02
CHRM3P20309 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CHRM3P20309 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
CHRM3P20309 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CHRM3P20309 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CHRM3P20309 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CHRM3P20309 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CHRM3P20309 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CHRM3P20309 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms