Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
NCK1P16333 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NCK1P16333 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
NCK1P16333 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NCK1P16333 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NCK1P16333 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
NCK1P16333 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
NCK1P16333 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NCK1P16333 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC14.4□□□□□ -0.1
NCK1P16333 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
NCK1P16333 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC14.4□□□□□ -0.1
NCK1P16333 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
NCK1P16333 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
NCK1P16333 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
NCK1P16333 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC14.39□□□□□ -0.11
NCK1P16333 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
NCK1P16333 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
NCK1P16333 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC14.39□□□□□ -0.11
NCK1P16333 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NCK1P16333 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC14.39□□□□□ -0.11
NCK1P16333 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NCK1P16333 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NCK1P16333 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC14.39□□□□□ -0.11
NCK1P16333 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
NCK1P16333 KRT8P12-202ENST00000472924 1397 ntBASIC14.39□□□□□ -0.11
NCK1P16333 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
NCK1P16333 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NCK1P16333 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
NCK1P16333 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
NCK1P16333 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NCK1P16333 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
NCK1P16333 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC14.39□□□□□ -0.11
NCK1P16333 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC14.39□□□□□ -0.11
NCK1P16333 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC14.39□□□□□ -0.11
NCK1P16333 PP7080-204ENST00000510714 601 ntTSL 3 BASIC14.39□□□□□ -0.11
NCK1P16333 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC14.39□□□□□ -0.11
NCK1P16333 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
NCK1P16333 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC14.39□□□□□ -0.11
NCK1P16333 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
NCK1P16333 TBCB-211ENST00000589996 724 ntTSL 3 BASIC14.39□□□□□ -0.11
NCK1P16333 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC14.39□□□□□ -0.11
NCK1P16333 RN7SL828P-201ENST00000607615 303 ntBASIC14.39□□□□□ -0.11
NCK1P16333 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
NCK1P16333 FAM197Y3-203ENST00000618346 717 ntBASIC14.39□□□□□ -0.11
NCK1P16333 AC055717.3-201ENST00000622967 595 ntBASIC14.39□□□□□ -0.11
NCK1P16333 AF228730.6-201ENST00000641497 218 ntBASIC14.39□□□□□ -0.11
NCK1P16333 AC084121.3-201ENST00000641716 218 ntBASIC14.39□□□□□ -0.11
NCK1P16333 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
NCK1P16333 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC14.39□□□□□ -0.11
NCK1P16333 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
NCK1P16333 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC14.39□□□□□ -0.11
NCK1P16333 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC14.39□□□□□ -0.11
NCK1P16333 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
NCK1P16333 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
NCK1P16333 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
NCK1P16333 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NCK1P16333 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
NCK1P16333 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC14.39□□□□□ -0.11
NCK1P16333 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
NCK1P16333 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
NCK1P16333 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NCK1P16333 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
NCK1P16333 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NCK1P16333 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NCK1P16333 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
NCK1P16333 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NCK1P16333 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NCK1P16333 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC14.38□□□□□ -0.11
NCK1P16333 AC005252.3-201ENST00000623855 2258 ntBASIC14.38□□□□□ -0.11
NCK1P16333 AC055811.4-201ENST00000624039 1754 ntBASIC14.38□□□□□ -0.11
NCK1P16333 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NCK1P16333 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
NCK1P16333 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC14.38□□□□□ -0.11
NCK1P16333 RPS19-201ENST00000221975 500 ntTSL 3 BASIC14.38□□□□□ -0.11
NCK1P16333 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
NCK1P16333 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
NCK1P16333 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NCK1P16333 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
NCK1P16333 AL133267.1-201ENST00000398220 340 ntBASIC14.38□□□□□ -0.11
NCK1P16333 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC14.38□□□□□ -0.11
NCK1P16333 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC14.38□□□□□ -0.11
NCK1P16333 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC14.38□□□□□ -0.11
NCK1P16333 LITAF-210ENST00000571976 548 ntTSL 2 BASIC14.38□□□□□ -0.11
NCK1P16333 LITAF-214ENST00000574703 486 ntTSL 2 BASIC14.38□□□□□ -0.11
NCK1P16333 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC14.38□□□□□ -0.11
NCK1P16333 PIN1-206ENST00000587625 878 ntTSL 2 BASIC14.38□□□□□ -0.11
NCK1P16333 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NCK1P16333 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
NCK1P16333 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC14.38□□□□□ -0.11
NCK1P16333 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC14.38□□□□□ -0.11
NCK1P16333 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NCK1P16333 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
NCK1P16333 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NCK1P16333 TP73-209ENST00000603362 1668 ntTSL 5 BASIC14.38□□□□□ -0.11
NCK1P16333 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
NCK1P16333 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NCK1P16333 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NCK1P16333 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NCK1P16333 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NCK1P16333 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms