Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 TNNI2-201ENST00000252898 678 ntAPPRIS P3 TSL 3 BASIC25.09■■□□□ 1.61
CFTRP13569 TNNI2-202ENST00000381905 706 ntAPPRIS ALT1 TSL 3 BASIC25.09■■□□□ 1.61
CFTRP13569 TNNI2-203ENST00000381906 745 ntAPPRIS P3 TSL 3 BASIC25.09■■□□□ 1.61
CFTRP13569 TNNI2-204ENST00000381911 743 ntAPPRIS P3 TSL 2 BASIC25.09■■□□□ 1.61
CFTRP13569 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC25.09■■□□□ 1.61
CFTRP13569 AC018814.1-201ENST00000418972 357 ntTSL 3 BASIC25.09■■□□□ 1.61
CFTRP13569 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
CFTRP13569 FTCDNL1-203ENST00000420922 772 ntAPPRIS P1 TSL 5 BASIC25.09■■□□□ 1.61
CFTRP13569 APCDD1L-AS1-206ENST00000445984 566 ntTSL 3 BASIC25.09■■□□□ 1.61
CFTRP13569 APCDD1L-AS1-208ENST00000448374 546 ntTSL 4 BASIC25.09■■□□□ 1.61
CFTRP13569 RNF216P1-212ENST00000493407 659 ntTSL 3 BASIC25.09■■□□□ 1.61
CFTRP13569 RN7SL564P-201ENST00000496309 250 ntBASIC25.09■■□□□ 1.61
CFTRP13569 AC109479.3-201ENST00000520163 360 ntTSL 3 BASIC25.09■■□□□ 1.61
CFTRP13569 SRP14-204ENST00000558720 780 ntTSL 2 BASIC25.09■■□□□ 1.61
CFTRP13569 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC25.09■■□□□ 1.61
CFTRP13569 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC25.09■■□□□ 1.61
CFTRP13569 LINC02018-201ENST00000608169 1268 ntTSL 4 BASIC25.09■■□□□ 1.61
CFTRP13569 AL627230.2-201ENST00000613254 655 ntBASIC25.09■■□□□ 1.61
CFTRP13569 MIR6746-201ENST00000620971 63 ntBASIC25.09■■□□□ 1.61
CFTRP13569 PROX1-AS1-235ENST00000628896 711 ntTSL 5 BASIC25.09■■□□□ 1.61
CFTRP13569 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
CFTRP13569 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
CFTRP13569 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC25.08■■□□□ 1.61
CFTRP13569 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
CFTRP13569 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC25.08■■□□□ 1.61
CFTRP13569 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC25.08■■□□□ 1.61
CFTRP13569 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC25.08■■□□□ 1.61
CFTRP13569 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC25.08■■□□□ 1.61
CFTRP13569 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC25.08■■□□□ 1.61
CFTRP13569 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC25.08■■□□□ 1.6
CFTRP13569 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC25.08■■□□□ 1.6
CFTRP13569 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC25.08■■□□□ 1.6
CFTRP13569 MDS2-201ENST00000374555 1029 ntAPPRIS P5 TSL 1 (best) BASIC25.08■■□□□ 1.6
CFTRP13569 AL451105.2-201ENST00000413763 1234 ntTSL 5 BASIC25.08■■□□□ 1.6
CFTRP13569 ITGA9-AS1-205ENST00000438136 578 ntTSL 4 BASIC25.08■■□□□ 1.6
CFTRP13569 GDNF-207ENST00000515058 764 ntTSL 5 BASIC25.08■■□□□ 1.6
CFTRP13569 TMEM123-208ENST00000532161 743 ntAPPRIS ALT2 TSL 3 BASIC25.08■■□□□ 1.6
CFTRP13569 MT2A-202ENST00000561491 581 ntTSL 2 BASIC25.08■■□□□ 1.6
CFTRP13569 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC25.08■■□□□ 1.6
CFTRP13569 BRSK1-203ENST00000585418 1104 ntTSL 1 (best) BASIC25.08■■□□□ 1.6
CFTRP13569 ZNF677-204ENST00000594681 935 ntTSL 2 BASIC25.08■■□□□ 1.6
CFTRP13569 AL078590.3-205ENST00000606039 465 ntTSL 5 BASIC25.08■■□□□ 1.6
CFTRP13569 AL139339.2-201ENST00000608063 657 ntBASIC25.08■■□□□ 1.6
CFTRP13569 AC010976.2-201ENST00000609697 852 ntBASIC25.08■■□□□ 1.6
CFTRP13569 AC090386.2-201ENST00000623010 1039 ntBASIC25.08■■□□□ 1.6
CFTRP13569 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
CFTRP13569 BABAM2-204ENST00000379624 1657 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
CFTRP13569 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC25.08■■□□□ 1.6
CFTRP13569 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC25.08■■□□□ 1.6
CFTRP13569 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
CFTRP13569 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC25.07■■□□□ 1.6
CFTRP13569 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC25.07■■□□□ 1.6
CFTRP13569 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
CFTRP13569 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC25.07■■□□□ 1.6
CFTRP13569 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
CFTRP13569 SCAMP1-AS1-201ENST00000421004 1479 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
CFTRP13569 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC25.07■■□□□ 1.6
CFTRP13569 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC25.07■■□□□ 1.6
CFTRP13569 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
CFTRP13569 AC092135.3-201ENST00000624151 1846 ntBASIC25.07■■□□□ 1.6
CFTRP13569 CDKN2C-202ENST00000371761 1220 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
CFTRP13569 ZNRD1-203ENST00000376782 736 ntAPPRIS P1 TSL 2 BASIC25.07■■□□□ 1.6
CFTRP13569 DARS-AS1-204ENST00000444406 442 ntTSL 2 BASIC25.07■■□□□ 1.6
CFTRP13569 TMEM222-204ENST00000466759 368 ntTSL 3 BASIC25.07■■□□□ 1.6
CFTRP13569 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC25.07■■□□□ 1.6
CFTRP13569 MUTYH-231ENST00000488731 740 ntTSL 5 BASIC25.07■■□□□ 1.6
CFTRP13569 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC25.07■■□□□ 1.6
CFTRP13569 ABHD17AP9-201ENST00000561925 548 ntBASIC25.07■■□□□ 1.6
CFTRP13569 AC023421.2-201ENST00000589510 313 ntTSL 5 BASIC25.07■■□□□ 1.6
CFTRP13569 LINC00244-201ENST00000625073 613 ntBASIC25.07■■□□□ 1.6
CFTRP13569 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
CFTRP13569 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC25.07■■□□□ 1.6
CFTRP13569 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC25.07■■□□□ 1.6
CFTRP13569 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
CFTRP13569 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
CFTRP13569 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC25.06■■□□□ 1.6
CFTRP13569 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC25.06■■□□□ 1.6
CFTRP13569 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
CFTRP13569 TEKT4P2-202ENST00000559466 1312 ntBASIC25.06■■□□□ 1.6
CFTRP13569 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
CFTRP13569 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
CFTRP13569 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
CFTRP13569 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
CFTRP13569 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC25.06■■□□□ 1.6
CFTRP13569 C3orf38-204ENST00000486971 1259 ntTSL 2 BASIC25.06■■□□□ 1.6
CFTRP13569 AP005264.6-204ENST00000588436 719 ntBASIC25.06■■□□□ 1.6
CFTRP13569 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
CFTRP13569 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC25.06■■□□□ 1.6
CFTRP13569 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
CFTRP13569 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
CFTRP13569 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC25.06■■□□□ 1.6
CFTRP13569 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC25.06■■□□□ 1.6
CFTRP13569 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
CFTRP13569 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
CFTRP13569 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC25.06■■□□□ 1.6
CFTRP13569 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
CFTRP13569 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
CFTRP13569 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
CFTRP13569 C20orf96-202ENST00000382369 1420 ntAPPRIS ALT2 TSL 5 BASIC25.05■■□□□ 1.6
CFTRP13569 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC25.05■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms