Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 AL353779.1-201ENST00000434793 351 ntBASIC15.02■□□□□ -0
COL6A2P12110 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
COL6A2P12110 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC15.02■□□□□ -0
COL6A2P12110 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC15.02■□□□□ -0
COL6A2P12110 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC15.02■□□□□ -0
COL6A2P12110 RAB35-202ENST00000534951 939 ntTSL 2 BASIC15.02■□□□□ -0
COL6A2P12110 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC15.02■□□□□ -0
COL6A2P12110 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC15.02■□□□□ -0
COL6A2P12110 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC15.02■□□□□ -0
COL6A2P12110 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC15.02■□□□□ -0
COL6A2P12110 AL596442.2-201ENST00000610240 980 ntBASIC15.02■□□□□ -0
COL6A2P12110 AL590560.3-201ENST00000623350 461 ntBASIC15.02■□□□□ -0
COL6A2P12110 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC15.02□□□□□ -0.01
COL6A2P12110 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
COL6A2P12110 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
COL6A2P12110 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
COL6A2P12110 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
COL6A2P12110 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC15.02□□□□□ -0.01
COL6A2P12110 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC15.02□□□□□ -0.01
COL6A2P12110 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
COL6A2P12110 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC15.02□□□□□ -0.01
COL6A2P12110 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
COL6A2P12110 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC15.02□□□□□ -0.01
COL6A2P12110 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
COL6A2P12110 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
COL6A2P12110 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC15.02□□□□□ -0.01
COL6A2P12110 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
COL6A2P12110 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC15.02□□□□□ -0.01
COL6A2P12110 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
COL6A2P12110 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
COL6A2P12110 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
COL6A2P12110 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
COL6A2P12110 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
COL6A2P12110 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
COL6A2P12110 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC15.01□□□□□ -0.01
COL6A2P12110 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
COL6A2P12110 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC15.01□□□□□ -0.01
COL6A2P12110 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC15.01□□□□□ -0.01
COL6A2P12110 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
COL6A2P12110 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC15.01□□□□□ -0.01
COL6A2P12110 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
COL6A2P12110 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
COL6A2P12110 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
COL6A2P12110 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC15.01□□□□□ -0.01
COL6A2P12110 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
COL6A2P12110 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
COL6A2P12110 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
COL6A2P12110 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
COL6A2P12110 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
COL6A2P12110 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
COL6A2P12110 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC15.01□□□□□ -0.01
COL6A2P12110 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
COL6A2P12110 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC15.01□□□□□ -0.01
COL6A2P12110 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
COL6A2P12110 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
COL6A2P12110 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
COL6A2P12110 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
COL6A2P12110 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC15.01□□□□□ -0.01
COL6A2P12110 HNRNPA3P1-201ENST00000401429 1139 ntBASIC15.01□□□□□ -0.01
COL6A2P12110 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC15.01□□□□□ -0.01
COL6A2P12110 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC15.01□□□□□ -0.01
COL6A2P12110 HLA-K-203ENST00000430151 1046 ntBASIC15.01□□□□□ -0.01
COL6A2P12110 HNRNPA3P5-201ENST00000455201 833 ntBASIC15.01□□□□□ -0.01
COL6A2P12110 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC15.01□□□□□ -0.01
COL6A2P12110 AC097493.3-201ENST00000509725 367 ntBASIC15.01□□□□□ -0.01
COL6A2P12110 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC15.01□□□□□ -0.01
COL6A2P12110 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC15.01□□□□□ -0.01
COL6A2P12110 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC15.01□□□□□ -0.01
COL6A2P12110 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC15.01□□□□□ -0.01
COL6A2P12110 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
COL6A2P12110 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
COL6A2P12110 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
COL6A2P12110 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC15.01□□□□□ -0.01
COL6A2P12110 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
COL6A2P12110 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
COL6A2P12110 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
COL6A2P12110 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC15.01□□□□□ -0.01
COL6A2P12110 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
COL6A2P12110 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
COL6A2P12110 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC15.01□□□□□ -0.01
COL6A2P12110 FES-203ENST00000394302 2133 ntTSL 5 BASIC15.01□□□□□ -0.01
COL6A2P12110 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
COL6A2P12110 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
COL6A2P12110 DRD5P1-201ENST00000456605 1438 ntBASIC15□□□□□ -0.01
COL6A2P12110 AC100757.3-201ENST00000622361 1406 ntBASIC15□□□□□ -0.01
COL6A2P12110 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC15□□□□□ -0.01
COL6A2P12110 AC152010.1-201ENST00000415779 2006 ntBASIC15□□□□□ -0.01
COL6A2P12110 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC15□□□□□ -0.01
COL6A2P12110 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
COL6A2P12110 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC15□□□□□ -0.01
COL6A2P12110 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
COL6A2P12110 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC15□□□□□ -0.01
COL6A2P12110 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
COL6A2P12110 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
COL6A2P12110 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC15□□□□□ -0.01
COL6A2P12110 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
COL6A2P12110 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC15□□□□□ -0.01
COL6A2P12110 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC15□□□□□ -0.01
COL6A2P12110 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC15□□□□□ -0.01
COL6A2P12110 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms