Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RB1P06400 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC15.88■□□□□ 0.13
RB1P06400 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC15.88■□□□□ 0.13
RB1P06400 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
RB1P06400 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
RB1P06400 AQP8-202ENST00000566125 1276 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RB1P06400 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC15.88■□□□□ 0.13
RB1P06400 YRDCP1-201ENST00000621419 643 ntBASIC15.88■□□□□ 0.13
RB1P06400 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RB1P06400 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RB1P06400 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RB1P06400 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
RB1P06400 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
RB1P06400 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RB1P06400 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RB1P06400 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
RB1P06400 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC15.88■□□□□ 0.13
RB1P06400 AC012508.2-201ENST00000567613 1472 ntBASIC15.88■□□□□ 0.13
RB1P06400 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
RB1P06400 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC15.88■□□□□ 0.13
RB1P06400 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
RB1P06400 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
RB1P06400 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RB1P06400 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC15.88■□□□□ 0.13
RB1P06400 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
RB1P06400 PES1-204ENST00000402284 2144 ntTSL 5 BASIC15.88■□□□□ 0.13
RB1P06400 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
RB1P06400 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC15.87■□□□□ 0.13
RB1P06400 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
RB1P06400 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC15.87■□□□□ 0.13
RB1P06400 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RB1P06400 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC15.87■□□□□ 0.13
RB1P06400 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RB1P06400 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
RB1P06400 STK26-204ENST00000481105 1835 ntTSL 2 BASIC15.87■□□□□ 0.13
RB1P06400 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RB1P06400 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RB1P06400 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
RB1P06400 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
RB1P06400 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RB1P06400 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
RB1P06400 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RB1P06400 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC15.87■□□□□ 0.13
RB1P06400 OR2K2-202ENST00000374428 1038 ntBASIC15.87■□□□□ 0.13
RB1P06400 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RB1P06400 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC15.87■□□□□ 0.13
RB1P06400 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC15.87■□□□□ 0.13
RB1P06400 TLE1P1-201ENST00000422965 589 ntBASIC15.87■□□□□ 0.13
RB1P06400 PFN2-202ENST00000423691 911 ntTSL 2 BASIC15.87■□□□□ 0.13
RB1P06400 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RB1P06400 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC15.87■□□□□ 0.13
RB1P06400 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RB1P06400 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC15.87■□□□□ 0.13
RB1P06400 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RB1P06400 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC15.87■□□□□ 0.13
RB1P06400 AC138894.2-201ENST00000602838 371 ntBASIC15.87■□□□□ 0.13
RB1P06400 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC15.87■□□□□ 0.13
RB1P06400 AC242376.2-201ENST00000619355 883 ntBASIC15.87■□□□□ 0.13
RB1P06400 SRSF3-208ENST00000620941 869 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
RB1P06400 AC027601.3-201ENST00000622907 509 ntBASIC15.87■□□□□ 0.13
RB1P06400 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC15.87■□□□□ 0.13
RB1P06400 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RB1P06400 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC15.87■□□□□ 0.13
RB1P06400 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
RB1P06400 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RB1P06400 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RB1P06400 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
RB1P06400 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
RB1P06400 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RB1P06400 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RB1P06400 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
RB1P06400 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC15.87■□□□□ 0.13
RB1P06400 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC15.87■□□□□ 0.13
RB1P06400 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RB1P06400 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RB1P06400 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC15.87■□□□□ 0.13
RB1P06400 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
RB1P06400 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC15.87■□□□□ 0.13
RB1P06400 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC15.86■□□□□ 0.13
RB1P06400 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
RB1P06400 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RB1P06400 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC15.86■□□□□ 0.13
RB1P06400 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
RB1P06400 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RB1P06400 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RB1P06400 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RB1P06400 AC136759.1-202ENST00000530858 2194 ntBASIC15.86■□□□□ 0.13
RB1P06400 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
RB1P06400 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RB1P06400 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RB1P06400 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RB1P06400 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
RB1P06400 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RB1P06400 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC15.86■□□□□ 0.13
RB1P06400 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RB1P06400 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
RB1P06400 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
RB1P06400 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RB1P06400 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC15.86■□□□□ 0.13
RB1P06400 NCR3-202ENST00000376071 541 ntTSL 5 BASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms