Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
PDGFAP04085 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
PDGFAP04085 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
PDGFAP04085 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
PDGFAP04085 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PDGFAP04085 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PDGFAP04085 ELK2AP-201ENST00000392510 1007 ntBASIC14.28□□□□□ -0.12
PDGFAP04085 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PDGFAP04085 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC14.28□□□□□ -0.12
PDGFAP04085 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC14.28□□□□□ -0.12
PDGFAP04085 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PDGFAP04085 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
PDGFAP04085 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC14.28□□□□□ -0.12
PDGFAP04085 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC14.28□□□□□ -0.12
PDGFAP04085 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PDGFAP04085 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC14.28□□□□□ -0.12
PDGFAP04085 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
PDGFAP04085 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PDGFAP04085 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC14.28□□□□□ -0.12
PDGFAP04085 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC14.28□□□□□ -0.12
PDGFAP04085 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC14.28□□□□□ -0.12
PDGFAP04085 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC14.28□□□□□ -0.12
PDGFAP04085 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PDGFAP04085 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC14.28□□□□□ -0.12
PDGFAP04085 NEU3-202ENST00000526068 431 ntTSL 2 BASIC14.28□□□□□ -0.12
PDGFAP04085 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
PDGFAP04085 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
PDGFAP04085 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC14.28□□□□□ -0.12
PDGFAP04085 CMC2-214ENST00000565925 640 ntTSL 5 BASIC14.28□□□□□ -0.12
PDGFAP04085 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC14.28□□□□□ -0.12
PDGFAP04085 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
PDGFAP04085 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC14.28□□□□□ -0.12
PDGFAP04085 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
PDGFAP04085 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PDGFAP04085 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC14.28□□□□□ -0.12
PDGFAP04085 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PDGFAP04085 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PDGFAP04085 AC005252.3-201ENST00000623855 2258 ntBASIC14.28□□□□□ -0.12
PDGFAP04085 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC14.28□□□□□ -0.12
PDGFAP04085 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
PDGFAP04085 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC14.28□□□□□ -0.12
PDGFAP04085 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
PDGFAP04085 AC007686.3-201ENST00000619017 3487 ntBASIC14.28□□□□□ -0.12
PDGFAP04085 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
PDGFAP04085 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC14.28□□□□□ -0.12
PDGFAP04085 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
PDGFAP04085 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC14.28□□□□□ -0.12
PDGFAP04085 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
PDGFAP04085 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
PDGFAP04085 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
PDGFAP04085 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC14.27□□□□□ -0.12
PDGFAP04085 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC14.27□□□□□ -0.12
PDGFAP04085 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PDGFAP04085 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PDGFAP04085 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
PDGFAP04085 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
PDGFAP04085 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PDGFAP04085 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC14.27□□□□□ -0.12
PDGFAP04085 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PDGFAP04085 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
PDGFAP04085 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PDGFAP04085 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC14.27□□□□□ -0.12
PDGFAP04085 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC14.27□□□□□ -0.12
PDGFAP04085 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
PDGFAP04085 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC14.27□□□□□ -0.12
PDGFAP04085 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PDGFAP04085 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC14.27□□□□□ -0.12
PDGFAP04085 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PDGFAP04085 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PDGFAP04085 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
PDGFAP04085 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
PDGFAP04085 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
PDGFAP04085 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PDGFAP04085 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
PDGFAP04085 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PDGFAP04085 GRN-222ENST00000639447 1314 ntTSL 2 BASIC14.27□□□□□ -0.12
PDGFAP04085 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
PDGFAP04085 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PDGFAP04085 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
PDGFAP04085 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PDGFAP04085 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PDGFAP04085 GUK1-206ENST00000366723 845 ntTSL 5 BASIC14.27□□□□□ -0.13
PDGFAP04085 PGGT1BP2-201ENST00000398621 1028 ntBASIC14.27□□□□□ -0.13
PDGFAP04085 MIR1202-201ENST00000408529 83 ntBASIC14.27□□□□□ -0.13
PDGFAP04085 BTBD6P1-201ENST00000412176 1267 ntBASIC14.27□□□□□ -0.13
PDGFAP04085 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC14.27□□□□□ -0.13
PDGFAP04085 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
PDGFAP04085 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC14.27□□□□□ -0.13
PDGFAP04085 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
PDGFAP04085 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC14.27□□□□□ -0.13
PDGFAP04085 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC14.27□□□□□ -0.13
PDGFAP04085 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC14.27□□□□□ -0.13
PDGFAP04085 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC14.27□□□□□ -0.13
PDGFAP04085 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC14.27□□□□□ -0.13
PDGFAP04085 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
PDGFAP04085 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC14.27□□□□□ -0.13
PDGFAP04085 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC14.27□□□□□ -0.13
PDGFAP04085 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
PDGFAP04085 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
PDGFAP04085 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms