Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC16.5■□□□□ 0.23
RNF40O75150 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
RNF40O75150 SBF1P1-201ENST00000444527 5631 ntBASIC16.5■□□□□ 0.23
RNF40O75150 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RNF40O75150 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RNF40O75150 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC16.5■□□□□ 0.23
RNF40O75150 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RNF40O75150 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
RNF40O75150 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
RNF40O75150 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC16.5■□□□□ 0.23
RNF40O75150 HAUS4P1-201ENST00000406739 1145 ntBASIC16.5■□□□□ 0.23
RNF40O75150 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
RNF40O75150 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RNF40O75150 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC16.5■□□□□ 0.23
RNF40O75150 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC16.5■□□□□ 0.23
RNF40O75150 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RNF40O75150 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
RNF40O75150 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
RNF40O75150 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC16.5■□□□□ 0.23
RNF40O75150 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
RNF40O75150 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC16.5■□□□□ 0.23
RNF40O75150 AC026790.2-201ENST00000606282 430 ntBASIC16.5■□□□□ 0.23
RNF40O75150 AL109936.8-201ENST00000641772 604 ntBASIC16.5■□□□□ 0.23
RNF40O75150 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC16.5■□□□□ 0.23
RNF40O75150 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC16.5■□□□□ 0.23
RNF40O75150 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
RNF40O75150 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC16.5■□□□□ 0.23
RNF40O75150 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
RNF40O75150 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC16.5■□□□□ 0.23
RNF40O75150 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC16.5■□□□□ 0.23
RNF40O75150 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RNF40O75150 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RNF40O75150 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RNF40O75150 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RNF40O75150 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RNF40O75150 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC16.49■□□□□ 0.23
RNF40O75150 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RNF40O75150 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RNF40O75150 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC16.49■□□□□ 0.23
RNF40O75150 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC16.49■□□□□ 0.23
RNF40O75150 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RNF40O75150 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RNF40O75150 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC16.49■□□□□ 0.23
RNF40O75150 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
RNF40O75150 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC16.49■□□□□ 0.23
RNF40O75150 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
RNF40O75150 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RNF40O75150 AC079776.1-201ENST00000401540 1152 ntBASIC16.49■□□□□ 0.23
RNF40O75150 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC16.49■□□□□ 0.23
RNF40O75150 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
RNF40O75150 AC112492.5-201ENST00000421897 457 ntBASIC16.49■□□□□ 0.23
RNF40O75150 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC16.49■□□□□ 0.23
RNF40O75150 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC16.49■□□□□ 0.23
RNF40O75150 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RNF40O75150 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC16.49■□□□□ 0.23
RNF40O75150 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC16.49■□□□□ 0.23
RNF40O75150 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC16.49■□□□□ 0.23
RNF40O75150 AC023310.3-201ENST00000557027 670 ntBASIC16.49■□□□□ 0.23
RNF40O75150 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC16.49■□□□□ 0.23
RNF40O75150 AC100756.1-201ENST00000562736 682 ntBASIC16.49■□□□□ 0.23
RNF40O75150 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RNF40O75150 AC138749.3-201ENST00000567691 622 ntBASIC16.49■□□□□ 0.23
RNF40O75150 AC116165.1-201ENST00000611806 668 ntBASIC16.49■□□□□ 0.23
RNF40O75150 5S_rRNA.22-201ENST00000614916 106 ntBASIC16.49■□□□□ 0.23
RNF40O75150 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
RNF40O75150 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RNF40O75150 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RNF40O75150 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RNF40O75150 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RNF40O75150 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RNF40O75150 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
RNF40O75150 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC16.49■□□□□ 0.23
RNF40O75150 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC16.49■□□□□ 0.23
RNF40O75150 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
RNF40O75150 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
RNF40O75150 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RNF40O75150 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC16.49■□□□□ 0.23
RNF40O75150 BEND3P1-201ENST00000421591 1944 ntBASIC16.49■□□□□ 0.23
RNF40O75150 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
RNF40O75150 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC16.49■□□□□ 0.23
RNF40O75150 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC16.48■□□□□ 0.23
RNF40O75150 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC16.48■□□□□ 0.23
RNF40O75150 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RNF40O75150 U82695.1-201ENST00000635752 1889 ntBASIC16.48■□□□□ 0.23
RNF40O75150 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC16.48■□□□□ 0.23
RNF40O75150 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RNF40O75150 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
RNF40O75150 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC16.48■□□□□ 0.23
RNF40O75150 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RNF40O75150 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RNF40O75150 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RNF40O75150 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
RNF40O75150 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
RNF40O75150 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC16.48■□□□□ 0.23
RNF40O75150 MIR1909-201ENST00000411312 80 ntBASIC16.48■□□□□ 0.23
RNF40O75150 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RNF40O75150 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RNF40O75150 MYCLP2-201ENST00000449268 967 ntBASIC16.48■□□□□ 0.23
RNF40O75150 AL589987.1-201ENST00000453380 819 ntBASIC16.48■□□□□ 0.23
RNF40O75150 RN7SL837P-201ENST00000463010 287 ntBASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 62.2 ms