Protein–RNA interactions for Protein: A6NHT5

HMX3, Homeobox protein HMX3, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMX3A6NHT5 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC13.24□□□□□ -0.29
HMX3A6NHT5 KRT8P22-201ENST00000562317 1415 ntBASIC13.24□□□□□ -0.29
HMX3A6NHT5 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC13.24□□□□□ -0.29
HMX3A6NHT5 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
HMX3A6NHT5 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC13.24□□□□□ -0.29
HMX3A6NHT5 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
HMX3A6NHT5 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC13.24□□□□□ -0.29
HMX3A6NHT5 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
HMX3A6NHT5 AL031284.1-201ENST00000419297 478 ntBASIC13.24□□□□□ -0.29
HMX3A6NHT5 FAAHP1-202ENST00000446499 1238 ntBASIC13.24□□□□□ -0.29
HMX3A6NHT5 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC13.24□□□□□ -0.29
HMX3A6NHT5 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HMX3A6NHT5 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC13.24□□□□□ -0.29
HMX3A6NHT5 KRT126P-201ENST00000549467 1181 ntBASIC13.24□□□□□ -0.29
HMX3A6NHT5 AC005412.3-201ENST00000580309 715 ntBASIC13.24□□□□□ -0.29
HMX3A6NHT5 AC104692.2-201ENST00000603054 253 ntBASIC13.24□□□□□ -0.29
HMX3A6NHT5 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC13.24□□□□□ -0.29
HMX3A6NHT5 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
HMX3A6NHT5 SPTSSB-201ENST00000359175 3103 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HMX3A6NHT5 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC13.24□□□□□ -0.29
HMX3A6NHT5 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC13.24□□□□□ -0.29
HMX3A6NHT5 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HMX3A6NHT5 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
HMX3A6NHT5 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
HMX3A6NHT5 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
HMX3A6NHT5 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HMX3A6NHT5 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC13.24□□□□□ -0.29
HMX3A6NHT5 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
HMX3A6NHT5 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC13.24□□□□□ -0.29
HMX3A6NHT5 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
HMX3A6NHT5 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HMX3A6NHT5 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HMX3A6NHT5 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HMX3A6NHT5 DYNC1I2-203ENST00000409197 2572 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
HMX3A6NHT5 DYNC1I2-206ENST00000409773 2583 ntTSL 2 BASIC13.24□□□□□ -0.29
HMX3A6NHT5 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC13.23□□□□□ -0.29
HMX3A6NHT5 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
HMX3A6NHT5 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC13.23□□□□□ -0.29
HMX3A6NHT5 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC13.23□□□□□ -0.29
HMX3A6NHT5 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC13.23□□□□□ -0.29
HMX3A6NHT5 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
HMX3A6NHT5 SLC5A9-210ENST00000533824 2219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
HMX3A6NHT5 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HMX3A6NHT5 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
HMX3A6NHT5 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
HMX3A6NHT5 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HMX3A6NHT5 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HMX3A6NHT5 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC13.23□□□□□ -0.29
HMX3A6NHT5 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
HMX3A6NHT5 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC13.23□□□□□ -0.29
HMX3A6NHT5 RAC2-202ENST00000401529 569 ntTSL 4 BASIC13.23□□□□□ -0.29
HMX3A6NHT5 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC13.23□□□□□ -0.29
HMX3A6NHT5 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HMX3A6NHT5 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC13.23□□□□□ -0.29
HMX3A6NHT5 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
HMX3A6NHT5 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC13.23□□□□□ -0.29
HMX3A6NHT5 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
HMX3A6NHT5 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC13.23□□□□□ -0.29
HMX3A6NHT5 CIPC-205ENST00000555437 566 ntTSL 3 BASIC13.23□□□□□ -0.29
HMX3A6NHT5 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC13.23□□□□□ -0.29
HMX3A6NHT5 OR7E47P-204ENST00000575924 449 ntBASIC13.23□□□□□ -0.29
HMX3A6NHT5 MIR4751-201ENST00000578027 74 ntBASIC13.23□□□□□ -0.29
HMX3A6NHT5 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
HMX3A6NHT5 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
HMX3A6NHT5 WT1-AS_2.1-201ENST00000613208 137 ntBASIC13.23□□□□□ -0.29
HMX3A6NHT5 MIR7706-201ENST00000613747 67 ntBASIC13.23□□□□□ -0.29
HMX3A6NHT5 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
HMX3A6NHT5 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC13.23□□□□□ -0.29
HMX3A6NHT5 TSN-212ENST00000536142 3328 ntTSL 2 BASIC13.23□□□□□ -0.29
HMX3A6NHT5 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HMX3A6NHT5 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
HMX3A6NHT5 CEP131-201ENST00000269392 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
HMX3A6NHT5 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
HMX3A6NHT5 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC13.23□□□□□ -0.29
HMX3A6NHT5 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
HMX3A6NHT5 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HMX3A6NHT5 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
HMX3A6NHT5 AC138969.3-201ENST00000546612 1459 ntBASIC13.23□□□□□ -0.29
HMX3A6NHT5 AC138932.2-201ENST00000548268 1459 ntBASIC13.23□□□□□ -0.29
HMX3A6NHT5 AC126755.4-201ENST00000549796 1459 ntBASIC13.23□□□□□ -0.29
HMX3A6NHT5 AC023794.5-201ENST00000564380 2157 ntBASIC13.22□□□□□ -0.29
HMX3A6NHT5 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
HMX3A6NHT5 AC018892.3-201ENST00000623986 2499 ntBASIC13.22□□□□□ -0.29
HMX3A6NHT5 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
HMX3A6NHT5 TNN-202ENST00000621086 4234 ntTSL 5 BASIC13.22□□□□□ -0.29
HMX3A6NHT5 C5orf56-206ENST00000612967 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
HMX3A6NHT5 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC13.22□□□□□ -0.29
HMX3A6NHT5 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
HMX3A6NHT5 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
HMX3A6NHT5 C19orf44-203ENST00000594035 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
HMX3A6NHT5 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC13.22□□□□□ -0.29
HMX3A6NHT5 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
HMX3A6NHT5 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
HMX3A6NHT5 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
HMX3A6NHT5 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HMX3A6NHT5 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
HMX3A6NHT5 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
HMX3A6NHT5 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC13.22□□□□□ -0.29
HMX3A6NHT5 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
HMX3A6NHT5 MRPL3P1-201ENST00000400109 1033 ntBASIC13.22□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms