Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAPPC4Q9Y296 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAPPC4Q9Y296 TP73-209ENST00000603362 1668 ntTSL 5 BASIC13.98□□□□□ -0.17
TRAPPC4Q9Y296 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAPPC4Q9Y296 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC13.98□□□□□ -0.17
TRAPPC4Q9Y296 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TRAPPC4Q9Y296 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAPPC4Q9Y296 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAPPC4Q9Y296 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAPPC4Q9Y296 TCAF1P1-201ENST00000414990 2232 ntBASIC13.98□□□□□ -0.17
TRAPPC4Q9Y296 AMT-224ENST00000635808 1610 ntTSL 5 BASIC13.98□□□□□ -0.17
TRAPPC4Q9Y296 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC13.98□□□□□ -0.17
TRAPPC4Q9Y296 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TRAPPC4Q9Y296 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
TRAPPC4Q9Y296 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
TRAPPC4Q9Y296 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC13.98□□□□□ -0.17
TRAPPC4Q9Y296 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAPPC4Q9Y296 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TRAPPC4Q9Y296 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAPPC4Q9Y296 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
TRAPPC4Q9Y296 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TRAPPC4Q9Y296 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAPPC4Q9Y296 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TRAPPC4Q9Y296 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
TRAPPC4Q9Y296 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC13.98□□□□□ -0.17
TRAPPC4Q9Y296 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAPPC4Q9Y296 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC13.98□□□□□ -0.17
TRAPPC4Q9Y296 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAPPC4Q9Y296 SUN1-204ENST00000403868 978 ntTSL 2 BASIC13.98□□□□□ -0.17
TRAPPC4Q9Y296 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC13.98□□□□□ -0.17
TRAPPC4Q9Y296 DFFBP1-201ENST00000433250 979 ntBASIC13.98□□□□□ -0.17
TRAPPC4Q9Y296 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC13.98□□□□□ -0.17
TRAPPC4Q9Y296 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC13.98□□□□□ -0.17
TRAPPC4Q9Y296 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC13.98□□□□□ -0.17
TRAPPC4Q9Y296 RN7SL399P-201ENST00000471648 279 ntBASIC13.98□□□□□ -0.17
TRAPPC4Q9Y296 CD81-207ENST00000481687 890 ntTSL 2 BASIC13.98□□□□□ -0.17
TRAPPC4Q9Y296 SERBP1P5-201ENST00000510079 1181 ntBASIC13.98□□□□□ -0.17
TRAPPC4Q9Y296 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC13.98□□□□□ -0.17
TRAPPC4Q9Y296 AC023310.3-201ENST00000557027 670 ntBASIC13.98□□□□□ -0.17
TRAPPC4Q9Y296 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC13.98□□□□□ -0.17
TRAPPC4Q9Y296 AC100756.1-201ENST00000562736 682 ntBASIC13.98□□□□□ -0.17
TRAPPC4Q9Y296 AC138749.3-201ENST00000567691 622 ntBASIC13.98□□□□□ -0.17
TRAPPC4Q9Y296 LINC02560-201ENST00000596379 459 ntBASIC13.98□□□□□ -0.17
TRAPPC4Q9Y296 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAPPC4Q9Y296 AC116165.1-201ENST00000611806 668 ntBASIC13.98□□□□□ -0.17
TRAPPC4Q9Y296 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TRAPPC4Q9Y296 AC008761.3-201ENST00000624803 892 ntBASIC13.98□□□□□ -0.17
TRAPPC4Q9Y296 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAPPC4Q9Y296 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAPPC4Q9Y296 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAPPC4Q9Y296 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC13.98□□□□□ -0.17
TRAPPC4Q9Y296 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
TRAPPC4Q9Y296 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
TRAPPC4Q9Y296 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAPPC4Q9Y296 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAPPC4Q9Y296 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAPPC4Q9Y296 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAPPC4Q9Y296 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAPPC4Q9Y296 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
TRAPPC4Q9Y296 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TRAPPC4Q9Y296 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAPPC4Q9Y296 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAPPC4Q9Y296 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAPPC4Q9Y296 SLC7A15P-201ENST00000424028 1363 ntBASIC13.97□□□□□ -0.17
TRAPPC4Q9Y296 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
TRAPPC4Q9Y296 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
TRAPPC4Q9Y296 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
TRAPPC4Q9Y296 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TRAPPC4Q9Y296 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC13.97□□□□□ -0.17
TRAPPC4Q9Y296 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAPPC4Q9Y296 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC13.97□□□□□ -0.17
TRAPPC4Q9Y296 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAPPC4Q9Y296 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAPPC4Q9Y296 LINC01230-201ENST00000625222 3017 ntBASIC13.97□□□□□ -0.17
TRAPPC4Q9Y296 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAPPC4Q9Y296 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAPPC4Q9Y296 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
TRAPPC4Q9Y296 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
TRAPPC4Q9Y296 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TRAPPC4Q9Y296 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAPPC4Q9Y296 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
TRAPPC4Q9Y296 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
TRAPPC4Q9Y296 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TRAPPC4Q9Y296 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TRAPPC4Q9Y296 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAPPC4Q9Y296 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAPPC4Q9Y296 AC087499.6-201ENST00000411576 835 ntBASIC13.97□□□□□ -0.17
TRAPPC4Q9Y296 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC13.97□□□□□ -0.17
TRAPPC4Q9Y296 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC13.97□□□□□ -0.17
TRAPPC4Q9Y296 AL353779.1-201ENST00000434793 351 ntBASIC13.97□□□□□ -0.17
TRAPPC4Q9Y296 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC13.97□□□□□ -0.17
TRAPPC4Q9Y296 TMPRSS11CP-201ENST00000453277 683 ntBASIC13.97□□□□□ -0.17
TRAPPC4Q9Y296 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
TRAPPC4Q9Y296 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
TRAPPC4Q9Y296 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC13.97□□□□□ -0.17
TRAPPC4Q9Y296 AC055876.2-201ENST00000531834 546 ntBASIC13.97□□□□□ -0.17
TRAPPC4Q9Y296 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC13.97□□□□□ -0.17
TRAPPC4Q9Y296 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC13.97□□□□□ -0.17
TRAPPC4Q9Y296 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TRAPPC4Q9Y296 RN7SL204P-201ENST00000582831 262 ntBASIC13.97□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms