Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 RPSAP15-201ENST00000448168 861 ntBASIC15.55■□□□□ 0.08
CDCA3Q99618 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC15.55■□□□□ 0.08
CDCA3Q99618 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CDCA3Q99618 AC018463.1-201ENST00000456674 917 ntBASIC15.55■□□□□ 0.08
CDCA3Q99618 RN7SL81P-201ENST00000493781 261 ntBASIC15.55■□□□□ 0.08
CDCA3Q99618 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC15.55■□□□□ 0.08
CDCA3Q99618 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CDCA3Q99618 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CDCA3Q99618 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
CDCA3Q99618 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
CDCA3Q99618 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC15.55■□□□□ 0.08
CDCA3Q99618 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC15.55■□□□□ 0.08
CDCA3Q99618 RPL17P45-201ENST00000586289 509 ntBASIC15.55■□□□□ 0.08
CDCA3Q99618 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC15.55■□□□□ 0.08
CDCA3Q99618 ZNF528-AS1-202ENST00000596746 929 ntTSL 5 BASIC15.55■□□□□ 0.08
CDCA3Q99618 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDCA3Q99618 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC15.55■□□□□ 0.08
CDCA3Q99618 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC15.55■□□□□ 0.08
CDCA3Q99618 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDCA3Q99618 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDCA3Q99618 PCDHA14-201ENST00000506751 2298 ntBASIC15.55■□□□□ 0.08
CDCA3Q99618 AC024909.3-201ENST00000611513 2257 ntBASIC15.55■□□□□ 0.08
CDCA3Q99618 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDCA3Q99618 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CDCA3Q99618 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC15.54■□□□□ 0.08
CDCA3Q99618 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC15.54■□□□□ 0.08
CDCA3Q99618 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDCA3Q99618 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDCA3Q99618 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
CDCA3Q99618 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC15.54■□□□□ 0.08
CDCA3Q99618 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDCA3Q99618 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDCA3Q99618 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDCA3Q99618 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDCA3Q99618 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
CDCA3Q99618 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
CDCA3Q99618 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDCA3Q99618 SUPT20HL2-201ENST00000486479 2409 ntBASIC15.54■□□□□ 0.08
CDCA3Q99618 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC15.54■□□□□ 0.08
CDCA3Q99618 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDCA3Q99618 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDCA3Q99618 AHCYP4-201ENST00000419201 1315 ntBASIC15.54■□□□□ 0.08
CDCA3Q99618 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDCA3Q99618 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDCA3Q99618 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
CDCA3Q99618 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDCA3Q99618 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDCA3Q99618 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
CDCA3Q99618 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
CDCA3Q99618 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC15.54■□□□□ 0.08
CDCA3Q99618 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC15.54■□□□□ 0.08
CDCA3Q99618 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC15.54■□□□□ 0.08
CDCA3Q99618 RPL18AP3-201ENST00000462885 528 ntBASIC15.54■□□□□ 0.08
CDCA3Q99618 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC15.54■□□□□ 0.08
CDCA3Q99618 AC114947.1-202ENST00000514136 344 ntBASIC15.54■□□□□ 0.08
CDCA3Q99618 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC15.54■□□□□ 0.08
CDCA3Q99618 FXYD2-205ENST00000528014 672 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
CDCA3Q99618 AP003398.1-201ENST00000531124 318 ntBASIC15.54■□□□□ 0.08
CDCA3Q99618 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC15.54■□□□□ 0.08
CDCA3Q99618 AC131206.1-201ENST00000538078 1211 ntBASIC15.54■□□□□ 0.08
CDCA3Q99618 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDCA3Q99618 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CDCA3Q99618 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC15.54■□□□□ 0.08
CDCA3Q99618 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC15.54■□□□□ 0.08
CDCA3Q99618 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC15.54■□□□□ 0.08
CDCA3Q99618 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
CDCA3Q99618 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDCA3Q99618 AL662844.4-201ENST00000606367 2838 ntBASIC15.54■□□□□ 0.08
CDCA3Q99618 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CDCA3Q99618 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC15.54■□□□□ 0.08
CDCA3Q99618 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC15.54■□□□□ 0.08
CDCA3Q99618 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDCA3Q99618 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CDCA3Q99618 AC015909.3-201ENST00000572855 1794 ntBASIC15.54■□□□□ 0.08
CDCA3Q99618 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDCA3Q99618 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDCA3Q99618 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDCA3Q99618 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CDCA3Q99618 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
CDCA3Q99618 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CDCA3Q99618 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC15.53■□□□□ 0.08
CDCA3Q99618 AC105250.1-201ENST00000509378 2057 ntBASIC15.53■□□□□ 0.08
CDCA3Q99618 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
CDCA3Q99618 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CDCA3Q99618 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDCA3Q99618 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
CDCA3Q99618 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
CDCA3Q99618 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC15.53■□□□□ 0.08
CDCA3Q99618 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CDCA3Q99618 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDCA3Q99618 C12orf76-207ENST00000549724 1302 ntTSL 5 BASIC15.53■□□□□ 0.08
CDCA3Q99618 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDCA3Q99618 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC15.53■□□□□ 0.08
CDCA3Q99618 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC15.53■□□□□ 0.08
CDCA3Q99618 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
CDCA3Q99618 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC15.53■□□□□ 0.08
CDCA3Q99618 AL807761.2-201ENST00000422849 729 ntBASIC15.53■□□□□ 0.08
CDCA3Q99618 AC012362.1-201ENST00000434906 739 ntBASIC15.53■□□□□ 0.08
CDCA3Q99618 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC15.53■□□□□ 0.08
CDCA3Q99618 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms