Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CSMD1Q96PZ7 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
CSMD1Q96PZ7 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
CSMD1Q96PZ7 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CSMD1Q96PZ7 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC12.63□□□□□ -0.39
CSMD1Q96PZ7 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC12.63□□□□□ -0.39
CSMD1Q96PZ7 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CSMD1Q96PZ7 AL672207.1-201ENST00000328462 1570 ntBASIC12.63□□□□□ -0.39
CSMD1Q96PZ7 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CSMD1Q96PZ7 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CSMD1Q96PZ7 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
CSMD1Q96PZ7 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CSMD1Q96PZ7 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CSMD1Q96PZ7 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
CSMD1Q96PZ7 LCE3B-201ENST00000335633 288 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
CSMD1Q96PZ7 AL583805.1-201ENST00000391389 531 ntBASIC12.63□□□□□ -0.39
CSMD1Q96PZ7 CACNG7-202ENST00000391766 631 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CSMD1Q96PZ7 AC093673.1-201ENST00000429630 648 ntTSL 2 BASIC12.63□□□□□ -0.39
CSMD1Q96PZ7 JAZF1-AS1-201ENST00000436758 548 ntTSL 2 BASIC12.63□□□□□ -0.39
CSMD1Q96PZ7 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC12.63□□□□□ -0.39
CSMD1Q96PZ7 AP002490.2-201ENST00000524791 560 ntBASIC12.63□□□□□ -0.39
CSMD1Q96PZ7 IFI27L1-212ENST00000557218 413 ntTSL 3 BASIC12.63□□□□□ -0.39
CSMD1Q96PZ7 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC12.63□□□□□ -0.39
CSMD1Q96PZ7 AP005212.2-201ENST00000584979 510 ntBASIC12.63□□□□□ -0.39
CSMD1Q96PZ7 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC12.63□□□□□ -0.39
CSMD1Q96PZ7 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CSMD1Q96PZ7 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CSMD1Q96PZ7 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC12.63□□□□□ -0.39
CSMD1Q96PZ7 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
CSMD1Q96PZ7 AC136621.1-201ENST00000624017 2304 ntBASIC12.63□□□□□ -0.39
CSMD1Q96PZ7 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
CSMD1Q96PZ7 WASH7P-201ENST00000488147 1351 ntBASIC12.63□□□□□ -0.39
CSMD1Q96PZ7 UPK1A-201ENST00000222275 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CSMD1Q96PZ7 NCR3-202ENST00000376071 541 ntTSL 5 BASIC12.63□□□□□ -0.39
CSMD1Q96PZ7 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CSMD1Q96PZ7 PRAME-206ENST00000406503 740 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
CSMD1Q96PZ7 IGKV1OR-2-201ENST00000457995 350 ntBASIC12.63□□□□□ -0.39
CSMD1Q96PZ7 RN7SL846P-201ENST00000467429 292 ntBASIC12.63□□□□□ -0.39
CSMD1Q96PZ7 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC12.63□□□□□ -0.39
CSMD1Q96PZ7 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CSMD1Q96PZ7 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CSMD1Q96PZ7 AC025183.3-201ENST00000623526 1482 ntBASIC12.63□□□□□ -0.39
CSMD1Q96PZ7 AKR1B1-201ENST00000285930 1409 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CSMD1Q96PZ7 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC12.63□□□□□ -0.39
CSMD1Q96PZ7 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC12.63□□□□□ -0.39
CSMD1Q96PZ7 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CSMD1Q96PZ7 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CSMD1Q96PZ7 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
CSMD1Q96PZ7 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CSMD1Q96PZ7 BAK1P1-201ENST00000317045 636 ntBASIC12.63□□□□□ -0.39
CSMD1Q96PZ7 RN7SL494P-201ENST00000461517 304 ntBASIC12.63□□□□□ -0.39
CSMD1Q96PZ7 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CSMD1Q96PZ7 YPEL4-209ENST00000534711 889 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
CSMD1Q96PZ7 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC12.63□□□□□ -0.39
CSMD1Q96PZ7 AC092073.1-202ENST00000606020 653 ntTSL 3 BASIC12.63□□□□□ -0.39
CSMD1Q96PZ7 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
CSMD1Q96PZ7 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CSMD1Q96PZ7 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CSMD1Q96PZ7 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CSMD1Q96PZ7 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CSMD1Q96PZ7 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CSMD1Q96PZ7 AL596087.1-201ENST00000400979 1969 ntBASIC12.62□□□□□ -0.39
CSMD1Q96PZ7 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CSMD1Q96PZ7 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
CSMD1Q96PZ7 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC12.62□□□□□ -0.39
CSMD1Q96PZ7 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CSMD1Q96PZ7 SUMO4-201ENST00000326669 1066 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
CSMD1Q96PZ7 AC106827.1-201ENST00000366454 431 ntBASIC12.62□□□□□ -0.39
CSMD1Q96PZ7 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CSMD1Q96PZ7 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC12.62□□□□□ -0.39
CSMD1Q96PZ7 SELENOW-202ENST00000593892 550 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
CSMD1Q96PZ7 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
CSMD1Q96PZ7 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
CSMD1Q96PZ7 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
CSMD1Q96PZ7 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
CSMD1Q96PZ7 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CSMD1Q96PZ7 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CSMD1Q96PZ7 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CSMD1Q96PZ7 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC12.62□□□□□ -0.39
CSMD1Q96PZ7 CICP11-201ENST00000434745 2827 ntBASIC12.62□□□□□ -0.39
CSMD1Q96PZ7 ING4-207ENST00000446105 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CSMD1Q96PZ7 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CSMD1Q96PZ7 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CSMD1Q96PZ7 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CSMD1Q96PZ7 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC12.62□□□□□ -0.39
CSMD1Q96PZ7 AL603832.2-201ENST00000566195 2125 ntBASIC12.62□□□□□ -0.39
CSMD1Q96PZ7 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
CSMD1Q96PZ7 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CSMD1Q96PZ7 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC12.62□□□□□ -0.39
CSMD1Q96PZ7 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC12.62□□□□□ -0.39
CSMD1Q96PZ7 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CSMD1Q96PZ7 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CSMD1Q96PZ7 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
CSMD1Q96PZ7 AL451105.2-201ENST00000413763 1234 ntTSL 5 BASIC12.62□□□□□ -0.39
CSMD1Q96PZ7 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC12.62□□□□□ -0.39
CSMD1Q96PZ7 ZNF268-210ENST00000541211 781 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CSMD1Q96PZ7 AC068867.1-201ENST00000559855 150 ntBASIC12.62□□□□□ -0.39
CSMD1Q96PZ7 AP001184.1-201ENST00000637936 376 ntBASIC12.62□□□□□ -0.39
CSMD1Q96PZ7 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC12.62□□□□□ -0.39
CSMD1Q96PZ7 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms