Protein–RNA interactions for Protein: Q8NFR7

CCDC148, Coiled-coil domain-containing protein 148, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148Q8NFR7 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC17.53■□□□□ 0.4
CCDC148Q8NFR7 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC148Q8NFR7 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC17.53■□□□□ 0.4
CCDC148Q8NFR7 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC148Q8NFR7 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC17.53■□□□□ 0.4
CCDC148Q8NFR7 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CCDC148Q8NFR7 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CCDC148Q8NFR7 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC148Q8NFR7 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC148Q8NFR7 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC148Q8NFR7 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC148Q8NFR7 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
CCDC148Q8NFR7 LRRC59-203ENST00000576448 1531 ntBASIC17.52■□□□□ 0.4
CCDC148Q8NFR7 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC17.52■□□□□ 0.4
CCDC148Q8NFR7 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC17.52■□□□□ 0.4
CCDC148Q8NFR7 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC148Q8NFR7 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC17.52■□□□□ 0.4
CCDC148Q8NFR7 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC17.52■□□□□ 0.4
CCDC148Q8NFR7 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC148Q8NFR7 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC148Q8NFR7 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC17.52■□□□□ 0.4
CCDC148Q8NFR7 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC148Q8NFR7 MGST3-203ENST00000367885 680 ntTSL 2 BASIC17.52■□□□□ 0.4
CCDC148Q8NFR7 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC17.52■□□□□ 0.4
CCDC148Q8NFR7 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
CCDC148Q8NFR7 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
CCDC148Q8NFR7 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC148Q8NFR7 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC17.52■□□□□ 0.4
CCDC148Q8NFR7 LSM5-207ENST00000410044 687 ntTSL 3 BASIC17.52■□□□□ 0.4
CCDC148Q8NFR7 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC17.52■□□□□ 0.4
CCDC148Q8NFR7 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC17.52■□□□□ 0.4
CCDC148Q8NFR7 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
CCDC148Q8NFR7 AC022616.1-201ENST00000518688 554 ntBASIC17.52■□□□□ 0.4
CCDC148Q8NFR7 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC17.52■□□□□ 0.4
CCDC148Q8NFR7 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC17.52■□□□□ 0.4
CCDC148Q8NFR7 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC17.52■□□□□ 0.4
CCDC148Q8NFR7 OR2I1P-210ENST00000642037 4691 ntBASIC17.52■□□□□ 0.4
CCDC148Q8NFR7 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC148Q8NFR7 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC148Q8NFR7 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC148Q8NFR7 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
CCDC148Q8NFR7 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
CCDC148Q8NFR7 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
CCDC148Q8NFR7 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CCDC148Q8NFR7 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CCDC148Q8NFR7 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CCDC148Q8NFR7 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC17.52■□□□□ 0.39
CCDC148Q8NFR7 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC17.52■□□□□ 0.39
CCDC148Q8NFR7 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC17.52■□□□□ 0.39
CCDC148Q8NFR7 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CCDC148Q8NFR7 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CCDC148Q8NFR7 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC17.52■□□□□ 0.39
CCDC148Q8NFR7 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC17.52■□□□□ 0.39
CCDC148Q8NFR7 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
CCDC148Q8NFR7 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CCDC148Q8NFR7 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC17.52■□□□□ 0.39
CCDC148Q8NFR7 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CCDC148Q8NFR7 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC17.52■□□□□ 0.39
CCDC148Q8NFR7 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC148Q8NFR7 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC17.51■□□□□ 0.39
CCDC148Q8NFR7 AC134312.5-201ENST00000568031 1313 ntBASIC17.51■□□□□ 0.39
CCDC148Q8NFR7 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC148Q8NFR7 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
CCDC148Q8NFR7 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC148Q8NFR7 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC148Q8NFR7 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC17.51■□□□□ 0.39
CCDC148Q8NFR7 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC148Q8NFR7 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
CCDC148Q8NFR7 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC148Q8NFR7 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC17.51■□□□□ 0.39
CCDC148Q8NFR7 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC148Q8NFR7 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC148Q8NFR7 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC17.51■□□□□ 0.39
CCDC148Q8NFR7 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC17.51■□□□□ 0.39
CCDC148Q8NFR7 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC17.51■□□□□ 0.39
CCDC148Q8NFR7 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC17.51■□□□□ 0.39
CCDC148Q8NFR7 FUZ-207ENST00000526575 482 ntTSL 4 BASIC17.51■□□□□ 0.39
CCDC148Q8NFR7 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC148Q8NFR7 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC148Q8NFR7 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC17.51■□□□□ 0.39
CCDC148Q8NFR7 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC17.51■□□□□ 0.39
CCDC148Q8NFR7 AC132938.2-201ENST00000579188 680 ntBASIC17.51■□□□□ 0.39
CCDC148Q8NFR7 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
CCDC148Q8NFR7 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
CCDC148Q8NFR7 IGHV3-72-202ENST00000621503 303 ntBASIC17.51■□□□□ 0.39
CCDC148Q8NFR7 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC17.51■□□□□ 0.39
CCDC148Q8NFR7 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC17.51■□□□□ 0.39
CCDC148Q8NFR7 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
CCDC148Q8NFR7 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC17.51■□□□□ 0.39
CCDC148Q8NFR7 AL591163.1-201ENST00000641757 987 ntBASIC17.51■□□□□ 0.39
CCDC148Q8NFR7 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC17.51■□□□□ 0.39
CCDC148Q8NFR7 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC148Q8NFR7 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC148Q8NFR7 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
CCDC148Q8NFR7 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC148Q8NFR7 ACE3P-201ENST00000423435 1973 ntBASIC17.51■□□□□ 0.39
CCDC148Q8NFR7 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC148Q8NFR7 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC148Q8NFR7 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC148Q8NFR7 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms