Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC12.06□□□□□ -0.48
TTC9CQ8N5M4 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TTC9CQ8N5M4 AC087499.6-201ENST00000411576 835 ntBASIC12.06□□□□□ -0.48
TTC9CQ8N5M4 NUS1P3-201ENST00000423502 862 ntBASIC12.06□□□□□ -0.48
TTC9CQ8N5M4 AC134915.1-201ENST00000426461 574 ntBASIC12.06□□□□□ -0.48
TTC9CQ8N5M4 AL353779.1-201ENST00000434793 351 ntBASIC12.06□□□□□ -0.48
TTC9CQ8N5M4 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
TTC9CQ8N5M4 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TTC9CQ8N5M4 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
TTC9CQ8N5M4 VDAC1P7-201ENST00000462417 847 ntBASIC12.06□□□□□ -0.48
TTC9CQ8N5M4 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC12.06□□□□□ -0.48
TTC9CQ8N5M4 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
TTC9CQ8N5M4 SERBP1P5-201ENST00000510079 1181 ntBASIC12.06□□□□□ -0.48
TTC9CQ8N5M4 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC12.06□□□□□ -0.48
TTC9CQ8N5M4 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC12.06□□□□□ -0.48
TTC9CQ8N5M4 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC12.06□□□□□ -0.48
TTC9CQ8N5M4 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC12.06□□□□□ -0.48
TTC9CQ8N5M4 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
TTC9CQ8N5M4 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC12.06□□□□□ -0.48
TTC9CQ8N5M4 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC12.06□□□□□ -0.48
TTC9CQ8N5M4 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC12.06□□□□□ -0.48
TTC9CQ8N5M4 AC107373.2-201ENST00000607735 490 ntBASIC12.06□□□□□ -0.48
TTC9CQ8N5M4 AC093726.1-201ENST00000608064 963 ntBASIC12.06□□□□□ -0.48
TTC9CQ8N5M4 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
TTC9CQ8N5M4 HFE2-206ENST00000634927 506 ntTSL 4 BASIC12.06□□□□□ -0.48
TTC9CQ8N5M4 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC12.06□□□□□ -0.48
TTC9CQ8N5M4 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TTC9CQ8N5M4 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC12.06□□□□□ -0.48
TTC9CQ8N5M4 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
TTC9CQ8N5M4 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC12.06□□□□□ -0.48
TTC9CQ8N5M4 ST20-AS1-201ENST00000560255 4223 ntBASIC12.06□□□□□ -0.48
TTC9CQ8N5M4 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
TTC9CQ8N5M4 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TTC9CQ8N5M4 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC12.06□□□□□ -0.48
TTC9CQ8N5M4 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TTC9CQ8N5M4 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC12.06□□□□□ -0.48
TTC9CQ8N5M4 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TTC9CQ8N5M4 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC12.06□□□□□ -0.48
TTC9CQ8N5M4 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC12.06□□□□□ -0.48
TTC9CQ8N5M4 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TTC9CQ8N5M4 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
TTC9CQ8N5M4 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
TTC9CQ8N5M4 AL360270.3-201ENST00000609118 1348 ntBASIC12.06□□□□□ -0.48
TTC9CQ8N5M4 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC12.06□□□□□ -0.48
TTC9CQ8N5M4 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
TTC9CQ8N5M4 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
TTC9CQ8N5M4 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TTC9CQ8N5M4 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TTC9CQ8N5M4 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC12.06□□□□□ -0.48
TTC9CQ8N5M4 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
TTC9CQ8N5M4 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
TTC9CQ8N5M4 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TTC9CQ8N5M4 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TTC9CQ8N5M4 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TTC9CQ8N5M4 AJ011931.1-201ENST00000618749 2492 ntBASIC12.05□□□□□ -0.48
TTC9CQ8N5M4 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
TTC9CQ8N5M4 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
TTC9CQ8N5M4 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC12.05□□□□□ -0.48
TTC9CQ8N5M4 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
TTC9CQ8N5M4 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
TTC9CQ8N5M4 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC12.05□□□□□ -0.48
TTC9CQ8N5M4 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC12.05□□□□□ -0.48
TTC9CQ8N5M4 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC12.05□□□□□ -0.48
TTC9CQ8N5M4 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
TTC9CQ8N5M4 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
TTC9CQ8N5M4 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
TTC9CQ8N5M4 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
TTC9CQ8N5M4 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
TTC9CQ8N5M4 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
TTC9CQ8N5M4 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC12.05□□□□□ -0.48
TTC9CQ8N5M4 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC12.05□□□□□ -0.48
TTC9CQ8N5M4 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC12.05□□□□□ -0.48
TTC9CQ8N5M4 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
TTC9CQ8N5M4 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC12.05□□□□□ -0.48
TTC9CQ8N5M4 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
TTC9CQ8N5M4 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
TTC9CQ8N5M4 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
TTC9CQ8N5M4 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
TTC9CQ8N5M4 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC12.05□□□□□ -0.48
TTC9CQ8N5M4 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC12.05□□□□□ -0.48
TTC9CQ8N5M4 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
TTC9CQ8N5M4 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
TTC9CQ8N5M4 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
TTC9CQ8N5M4 METTL26-204ENST00000397665 558 ntTSL 2 BASIC12.05□□□□□ -0.48
TTC9CQ8N5M4 AL442647.2-201ENST00000429864 857 ntBASIC12.05□□□□□ -0.48
TTC9CQ8N5M4 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC12.05□□□□□ -0.48
TTC9CQ8N5M4 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC12.05□□□□□ -0.48
TTC9CQ8N5M4 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC12.05□□□□□ -0.48
TTC9CQ8N5M4 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC12.05□□□□□ -0.48
TTC9CQ8N5M4 AL096865.1-201ENST00000606796 927 ntBASIC12.05□□□□□ -0.48
TTC9CQ8N5M4 AC004233.3-201ENST00000607794 1269 ntBASIC12.05□□□□□ -0.48
TTC9CQ8N5M4 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC12.05□□□□□ -0.48
TTC9CQ8N5M4 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC12.05□□□□□ -0.48
TTC9CQ8N5M4 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
TTC9CQ8N5M4 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
TTC9CQ8N5M4 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
TTC9CQ8N5M4 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
TTC9CQ8N5M4 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
TTC9CQ8N5M4 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
TTC9CQ8N5M4 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms