Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC16.79■□□□□ 0.28
CCDC60Q8IWA6 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC60Q8IWA6 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC16.79■□□□□ 0.28
CCDC60Q8IWA6 MIR6787-201ENST00000616675 61 ntBASIC16.79■□□□□ 0.28
CCDC60Q8IWA6 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
CCDC60Q8IWA6 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC60Q8IWA6 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC60Q8IWA6 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC60Q8IWA6 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
CCDC60Q8IWA6 AC018735.1-201ENST00000437208 1502 ntBASIC16.79■□□□□ 0.28
CCDC60Q8IWA6 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC60Q8IWA6 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC60Q8IWA6 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC60Q8IWA6 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC16.79■□□□□ 0.28
CCDC60Q8IWA6 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CCDC60Q8IWA6 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC16.79■□□□□ 0.28
CCDC60Q8IWA6 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC16.79■□□□□ 0.28
CCDC60Q8IWA6 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC60Q8IWA6 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC60Q8IWA6 SLC9A7P1-201ENST00000554295 3311 ntBASIC16.78■□□□□ 0.28
CCDC60Q8IWA6 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC60Q8IWA6 AC020907.1-201ENST00000616460 1350 ntBASIC16.78■□□□□ 0.28
CCDC60Q8IWA6 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC60Q8IWA6 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
CCDC60Q8IWA6 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC60Q8IWA6 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
CCDC60Q8IWA6 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC16.78■□□□□ 0.28
CCDC60Q8IWA6 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CCDC60Q8IWA6 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC60Q8IWA6 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC60Q8IWA6 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.78■□□□□ 0.28
CCDC60Q8IWA6 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC60Q8IWA6 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC60Q8IWA6 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC60Q8IWA6 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC60Q8IWA6 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC16.78■□□□□ 0.28
CCDC60Q8IWA6 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC60Q8IWA6 MIR663B-201ENST00000408361 115 ntBASIC16.78■□□□□ 0.28
CCDC60Q8IWA6 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC60Q8IWA6 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CCDC60Q8IWA6 AC006033.1-201ENST00000440505 426 ntBASIC16.78■□□□□ 0.28
CCDC60Q8IWA6 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC16.78■□□□□ 0.28
CCDC60Q8IWA6 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC60Q8IWA6 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC60Q8IWA6 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC16.78■□□□□ 0.28
CCDC60Q8IWA6 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC60Q8IWA6 AC104982.3-201ENST00000581995 514 ntBASIC16.78■□□□□ 0.28
CCDC60Q8IWA6 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC16.78■□□□□ 0.28
CCDC60Q8IWA6 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC16.78■□□□□ 0.28
CCDC60Q8IWA6 AC244157.2-201ENST00000616239 1006 ntBASIC16.78■□□□□ 0.28
CCDC60Q8IWA6 AP001002.3-201ENST00000623482 206 ntBASIC16.78■□□□□ 0.28
CCDC60Q8IWA6 AL008638.5-201ENST00000623814 1298 ntBASIC16.78■□□□□ 0.28
CCDC60Q8IWA6 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC16.78■□□□□ 0.28
CCDC60Q8IWA6 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC60Q8IWA6 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC16.78■□□□□ 0.28
CCDC60Q8IWA6 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC16.78■□□□□ 0.28
CCDC60Q8IWA6 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC16.78■□□□□ 0.28
CCDC60Q8IWA6 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC16.78■□□□□ 0.28
CCDC60Q8IWA6 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC60Q8IWA6 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC60Q8IWA6 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
CCDC60Q8IWA6 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
CCDC60Q8IWA6 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC16.78■□□□□ 0.28
CCDC60Q8IWA6 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC60Q8IWA6 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC60Q8IWA6 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC60Q8IWA6 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC16.78■□□□□ 0.28
CCDC60Q8IWA6 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC60Q8IWA6 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC60Q8IWA6 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC60Q8IWA6 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
CCDC60Q8IWA6 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
CCDC60Q8IWA6 FES-204ENST00000414248 2327 ntTSL 2 BASIC16.78■□□□□ 0.28
CCDC60Q8IWA6 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC16.78■□□□□ 0.28
CCDC60Q8IWA6 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC60Q8IWA6 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC60Q8IWA6 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC16.77■□□□□ 0.28
CCDC60Q8IWA6 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC60Q8IWA6 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC16.77■□□□□ 0.28
CCDC60Q8IWA6 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC16.77■□□□□ 0.28
CCDC60Q8IWA6 AL138725.1-201ENST00000407347 1314 ntBASIC16.77■□□□□ 0.28
CCDC60Q8IWA6 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC60Q8IWA6 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC60Q8IWA6 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.77■□□□□ 0.28
CCDC60Q8IWA6 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC16.77■□□□□ 0.28
CCDC60Q8IWA6 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC60Q8IWA6 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC60Q8IWA6 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
CCDC60Q8IWA6 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC60Q8IWA6 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
CCDC60Q8IWA6 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC16.77■□□□□ 0.28
CCDC60Q8IWA6 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC16.77■□□□□ 0.28
CCDC60Q8IWA6 AC100850.1-201ENST00000506768 649 ntBASIC16.77■□□□□ 0.28
CCDC60Q8IWA6 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC16.77■□□□□ 0.28
CCDC60Q8IWA6 NOP2-211ENST00000540228 668 ntTSL 2 BASIC16.77■□□□□ 0.28
CCDC60Q8IWA6 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
CCDC60Q8IWA6 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC16.77■□□□□ 0.28
CCDC60Q8IWA6 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC16.77■□□□□ 0.28
CCDC60Q8IWA6 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC16.77■□□□□ 0.28
CCDC60Q8IWA6 AC244093.1-201ENST00000610837 814 ntBASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms