Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC14.46□□□□□ -0.1
RIF1Q5UIP0 AL355537.2-201ENST00000453367 375 ntTSL 2 BASIC14.46□□□□□ -0.1
RIF1Q5UIP0 ANKRD2-204ENST00000455090 1072 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
RIF1Q5UIP0 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC14.46□□□□□ -0.1
RIF1Q5UIP0 ALG3P1-201ENST00000508806 1114 ntBASIC14.46□□□□□ -0.1
RIF1Q5UIP0 AC009093.2-201ENST00000563477 546 ntTSL 4 BASIC14.46□□□□□ -0.1
RIF1Q5UIP0 AC080013.5-201ENST00000607044 679 ntBASIC14.46□□□□□ -0.1
RIF1Q5UIP0 AC138696.2-201ENST00000607376 223 ntBASIC14.46□□□□□ -0.1
RIF1Q5UIP0 AC006483.2-201ENST00000609813 515 ntBASIC14.46□□□□□ -0.1
RIF1Q5UIP0 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC14.45□□□□□ -0.1
RIF1Q5UIP0 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RIF1Q5UIP0 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
RIF1Q5UIP0 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
RIF1Q5UIP0 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
RIF1Q5UIP0 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RIF1Q5UIP0 NNMT-203ENST00000535401 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RIF1Q5UIP0 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RIF1Q5UIP0 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RIF1Q5UIP0 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RIF1Q5UIP0 MRPL35-201ENST00000254644 1061 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RIF1Q5UIP0 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
RIF1Q5UIP0 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
RIF1Q5UIP0 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
RIF1Q5UIP0 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
RIF1Q5UIP0 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RIF1Q5UIP0 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
RIF1Q5UIP0 HLF-202ENST00000430986 1385 ntTSL 2 BASIC14.45□□□□□ -0.1
RIF1Q5UIP0 CSNK1G2P1-201ENST00000442675 955 ntBASIC14.45□□□□□ -0.1
RIF1Q5UIP0 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RIF1Q5UIP0 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RIF1Q5UIP0 AC007952.4-201ENST00000573866 637 ntBASIC14.45□□□□□ -0.1
RIF1Q5UIP0 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
RIF1Q5UIP0 CYP4F23P-201ENST00000593402 1579 ntBASIC14.45□□□□□ -0.1
RIF1Q5UIP0 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC14.45□□□□□ -0.1
RIF1Q5UIP0 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
RIF1Q5UIP0 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RIF1Q5UIP0 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC14.45□□□□□ -0.1
RIF1Q5UIP0 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
RIF1Q5UIP0 PRAL-201ENST00000624952 3286 ntBASIC14.45□□□□□ -0.1
RIF1Q5UIP0 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RIF1Q5UIP0 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RIF1Q5UIP0 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
RIF1Q5UIP0 OPN1SW-201ENST00000249389 1096 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RIF1Q5UIP0 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC14.44□□□□□ -0.1
RIF1Q5UIP0 CIDEC-205ENST00000443115 443 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RIF1Q5UIP0 CD164-210ENST00000512821 964 ntTSL 2 BASIC14.44□□□□□ -0.1
RIF1Q5UIP0 AC022858.1-202ENST00000521084 393 ntTSL 3 BASIC14.44□□□□□ -0.1
RIF1Q5UIP0 AC009163.5-202ENST00000571737 466 ntTSL 3 BASIC14.44□□□□□ -0.1
RIF1Q5UIP0 FXYD3-204ENST00000603181 758 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
RIF1Q5UIP0 RNF103-CHMP3-202ENST00000604011 1135 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
RIF1Q5UIP0 AP000769.1-203ENST00000637245 208 ntBASIC14.44□□□□□ -0.1
RIF1Q5UIP0 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC14.44□□□□□ -0.1
RIF1Q5UIP0 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
RIF1Q5UIP0 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC14.44□□□□□ -0.1
RIF1Q5UIP0 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC14.44□□□□□ -0.1
RIF1Q5UIP0 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RIF1Q5UIP0 AL359258.3-201ENST00000622910 2331 ntBASIC14.44□□□□□ -0.1
RIF1Q5UIP0 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
RIF1Q5UIP0 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RIF1Q5UIP0 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
RIF1Q5UIP0 IZUMO1R-201ENST00000328458 798 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
RIF1Q5UIP0 HIST1H2BF-201ENST00000356530 1196 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
RIF1Q5UIP0 AL121983.2-202ENST00000419983 535 ntTSL 3 BASIC14.44□□□□□ -0.1
RIF1Q5UIP0 DDX39B-AS1-208ENST00000420520 516 ntTSL 3 BASIC14.44□□□□□ -0.1
RIF1Q5UIP0 NAA60-205ENST00000424546 1149 ntTSL 2 BASIC14.44□□□□□ -0.1
RIF1Q5UIP0 HIST1H2APS2-201ENST00000454426 370 ntBASIC14.44□□□□□ -0.1
RIF1Q5UIP0 LINC02063-201ENST00000503415 566 ntTSL 4 BASIC14.44□□□□□ -0.1
RIF1Q5UIP0 AC090152.1-203ENST00000517898 1106 ntTSL 2 BASIC14.44□□□□□ -0.1
RIF1Q5UIP0 TRMT112P3-201ENST00000580149 358 ntBASIC14.44□□□□□ -0.1
RIF1Q5UIP0 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC14.44□□□□□ -0.1
RIF1Q5UIP0 AC010632.2-201ENST00000588369 1224 ntBASIC14.44□□□□□ -0.1
RIF1Q5UIP0 AC005759.1-202ENST00000599416 415 ntTSL 3 BASIC14.44□□□□□ -0.1
RIF1Q5UIP0 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC14.44□□□□□ -0.1
RIF1Q5UIP0 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RIF1Q5UIP0 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
RIF1Q5UIP0 AC018629.1-201ENST00000623381 1736 ntBASIC14.44□□□□□ -0.1
RIF1Q5UIP0 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC14.44□□□□□ -0.1
RIF1Q5UIP0 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
RIF1Q5UIP0 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC14.44□□□□□ -0.1
RIF1Q5UIP0 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RIF1Q5UIP0 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RIF1Q5UIP0 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RIF1Q5UIP0 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
RIF1Q5UIP0 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC14.44□□□□□ -0.1
RIF1Q5UIP0 ME2P1-201ENST00000426028 1970 ntBASIC14.44□□□□□ -0.1
RIF1Q5UIP0 API5-208ENST00000531273 1868 ntTSL 2 BASIC14.44□□□□□ -0.1
RIF1Q5UIP0 PTGER4P2-201ENST00000328411 252 ntBASIC14.43□□□□□ -0.1
RIF1Q5UIP0 AC106827.1-201ENST00000366454 431 ntBASIC14.43□□□□□ -0.1
RIF1Q5UIP0 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RIF1Q5UIP0 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
RIF1Q5UIP0 TXNL4B-203ENST00000426362 965 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
RIF1Q5UIP0 AC027612.2-202ENST00000445955 1199 ntBASIC14.43□□□□□ -0.1
RIF1Q5UIP0 AL162377.1-202ENST00000456688 1181 ntTSL 2 BASIC14.43□□□□□ -0.1
RIF1Q5UIP0 PTGER4P3-201ENST00000458150 252 ntBASIC14.43□□□□□ -0.1
RIF1Q5UIP0 AADACL2-AS1-202ENST00000483843 628 ntTSL 5 BASIC14.43□□□□□ -0.1
RIF1Q5UIP0 MUSTN1-202ENST00000486659 622 ntTSL 2 BASIC14.43□□□□□ -0.1
RIF1Q5UIP0 AC138701.2-201ENST00000553634 226 ntBASIC14.43□□□□□ -0.1
RIF1Q5UIP0 ZFP1-207ENST00000567481 493 ntTSL 4 BASIC14.43□□□□□ -0.1
RIF1Q5UIP0 AC003006.1-202ENST00000594684 612 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RIF1Q5UIP0 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms