Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RNFT1Q5M7Z0 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RNFT1Q5M7Z0 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC13.62□□□□□ -0.23
RNFT1Q5M7Z0 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
RNFT1Q5M7Z0 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
RNFT1Q5M7Z0 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RNFT1Q5M7Z0 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RNFT1Q5M7Z0 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RNFT1Q5M7Z0 GSN-206ENST00000394353 2311 ntTSL 2 BASIC13.62□□□□□ -0.23
RNFT1Q5M7Z0 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC13.62□□□□□ -0.23
RNFT1Q5M7Z0 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RNFT1Q5M7Z0 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RNFT1Q5M7Z0 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RNFT1Q5M7Z0 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC13.61□□□□□ -0.23
RNFT1Q5M7Z0 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RNFT1Q5M7Z0 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC13.61□□□□□ -0.23
RNFT1Q5M7Z0 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC13.61□□□□□ -0.23
RNFT1Q5M7Z0 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RNFT1Q5M7Z0 AP000845.1-201ENST00000581677 2131 ntBASIC13.61□□□□□ -0.23
RNFT1Q5M7Z0 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC13.61□□□□□ -0.23
RNFT1Q5M7Z0 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RNFT1Q5M7Z0 C18orf15-201ENST00000623680 2534 ntBASIC13.61□□□□□ -0.23
RNFT1Q5M7Z0 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RNFT1Q5M7Z0 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC13.61□□□□□ -0.23
RNFT1Q5M7Z0 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC13.61□□□□□ -0.23
RNFT1Q5M7Z0 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
RNFT1Q5M7Z0 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
RNFT1Q5M7Z0 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RNFT1Q5M7Z0 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RNFT1Q5M7Z0 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RNFT1Q5M7Z0 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC13.61□□□□□ -0.23
RNFT1Q5M7Z0 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
RNFT1Q5M7Z0 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
RNFT1Q5M7Z0 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
RNFT1Q5M7Z0 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC13.61□□□□□ -0.23
RNFT1Q5M7Z0 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RNFT1Q5M7Z0 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC13.61□□□□□ -0.23
RNFT1Q5M7Z0 RN7SKP175-201ENST00000408472 289 ntBASIC13.61□□□□□ -0.23
RNFT1Q5M7Z0 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RNFT1Q5M7Z0 SLC25A24P2-201ENST00000415059 510 ntBASIC13.61□□□□□ -0.23
RNFT1Q5M7Z0 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC13.61□□□□□ -0.23
RNFT1Q5M7Z0 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC13.61□□□□□ -0.23
RNFT1Q5M7Z0 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RNFT1Q5M7Z0 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC13.61□□□□□ -0.23
RNFT1Q5M7Z0 ADM-202ENST00000524948 584 ntTSL 2 BASIC13.61□□□□□ -0.23
RNFT1Q5M7Z0 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC13.61□□□□□ -0.23
RNFT1Q5M7Z0 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC13.61□□□□□ -0.23
RNFT1Q5M7Z0 MIR4783-201ENST00000580343 82 ntBASIC13.61□□□□□ -0.23
RNFT1Q5M7Z0 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC13.61□□□□□ -0.23
RNFT1Q5M7Z0 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RNFT1Q5M7Z0 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RNFT1Q5M7Z0 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RNFT1Q5M7Z0 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC13.61□□□□□ -0.23
RNFT1Q5M7Z0 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RNFT1Q5M7Z0 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC13.61□□□□□ -0.23
RNFT1Q5M7Z0 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RNFT1Q5M7Z0 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RNFT1Q5M7Z0 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RNFT1Q5M7Z0 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC13.61□□□□□ -0.23
RNFT1Q5M7Z0 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
RNFT1Q5M7Z0 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
RNFT1Q5M7Z0 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RNFT1Q5M7Z0 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC13.61□□□□□ -0.23
RNFT1Q5M7Z0 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC13.61□□□□□ -0.23
RNFT1Q5M7Z0 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC13.61□□□□□ -0.23
RNFT1Q5M7Z0 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RNFT1Q5M7Z0 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
RNFT1Q5M7Z0 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC13.61□□□□□ -0.23
RNFT1Q5M7Z0 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RNFT1Q5M7Z0 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
RNFT1Q5M7Z0 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
RNFT1Q5M7Z0 ING5-213ENST00000636051 4199 ntTSL 5 BASIC13.61□□□□□ -0.23
RNFT1Q5M7Z0 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RNFT1Q5M7Z0 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC13.6□□□□□ -0.23
RNFT1Q5M7Z0 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RNFT1Q5M7Z0 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC13.6□□□□□ -0.23
RNFT1Q5M7Z0 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
RNFT1Q5M7Z0 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC13.6□□□□□ -0.23
RNFT1Q5M7Z0 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC13.6□□□□□ -0.23
RNFT1Q5M7Z0 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RNFT1Q5M7Z0 AC011840.2-201ENST00000563063 1520 ntBASIC13.6□□□□□ -0.23
RNFT1Q5M7Z0 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
RNFT1Q5M7Z0 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC13.6□□□□□ -0.23
RNFT1Q5M7Z0 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC13.6□□□□□ -0.23
RNFT1Q5M7Z0 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
RNFT1Q5M7Z0 ANKRD26P3-201ENST00000454044 2748 ntBASIC13.6□□□□□ -0.23
RNFT1Q5M7Z0 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RNFT1Q5M7Z0 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
RNFT1Q5M7Z0 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RNFT1Q5M7Z0 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RNFT1Q5M7Z0 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RNFT1Q5M7Z0 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RNFT1Q5M7Z0 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
RNFT1Q5M7Z0 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RNFT1Q5M7Z0 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC13.6□□□□□ -0.23
RNFT1Q5M7Z0 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
RNFT1Q5M7Z0 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
RNFT1Q5M7Z0 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC13.6□□□□□ -0.23
RNFT1Q5M7Z0 AC016700.1-201ENST00000429424 312 ntBASIC13.6□□□□□ -0.23
RNFT1Q5M7Z0 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 544.9 ms