Protein–RNA interactions for Protein: Q3B726

TWISTNB, DNA-directed RNA polymerase I subunit RPA43, humanhuman

Predicted RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TWISTNBQ3B726 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
TWISTNBQ3B726 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TWISTNBQ3B726 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC19.4■□□□□ 0.7
TWISTNBQ3B726 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TWISTNBQ3B726 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TWISTNBQ3B726 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
TWISTNBQ3B726 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC19.39■□□□□ 0.7
TWISTNBQ3B726 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
TWISTNBQ3B726 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC19.39■□□□□ 0.7
TWISTNBQ3B726 TPO-203ENST00000346956 2923 ntTSL 5 BASIC19.39■□□□□ 0.7
TWISTNBQ3B726 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
TWISTNBQ3B726 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TWISTNBQ3B726 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC19.39■□□□□ 0.69
TWISTNBQ3B726 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC19.39■□□□□ 0.69
TWISTNBQ3B726 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TWISTNBQ3B726 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TWISTNBQ3B726 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
TWISTNBQ3B726 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC19.39■□□□□ 0.69
TWISTNBQ3B726 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TWISTNBQ3B726 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TWISTNBQ3B726 AL391280.1-201ENST00000506969 1062 ntBASIC19.39■□□□□ 0.69
TWISTNBQ3B726 MFF-223ENST00000524634 647 ntTSL 2 BASIC19.39■□□□□ 0.69
TWISTNBQ3B726 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC19.39■□□□□ 0.69
TWISTNBQ3B726 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC19.39■□□□□ 0.69
TWISTNBQ3B726 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TWISTNBQ3B726 AC106820.3-201ENST00000561653 397 ntBASIC19.39■□□□□ 0.69
TWISTNBQ3B726 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC19.39■□□□□ 0.69
TWISTNBQ3B726 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC19.39■□□□□ 0.69
TWISTNBQ3B726 AL359881.2-201ENST00000602973 570 ntBASIC19.39■□□□□ 0.69
TWISTNBQ3B726 AC008687.7-202ENST00000637404 953 ntBASIC19.39■□□□□ 0.69
TWISTNBQ3B726 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
TWISTNBQ3B726 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC19.39■□□□□ 0.69
TWISTNBQ3B726 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TWISTNBQ3B726 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
TWISTNBQ3B726 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
TWISTNBQ3B726 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TWISTNBQ3B726 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC19.39■□□□□ 0.69
TWISTNBQ3B726 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TWISTNBQ3B726 GPI-205ENST00000586425 1799 ntTSL 5 BASIC19.39■□□□□ 0.69
TWISTNBQ3B726 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
TWISTNBQ3B726 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC19.39■□□□□ 0.69
TWISTNBQ3B726 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
TWISTNBQ3B726 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TWISTNBQ3B726 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TWISTNBQ3B726 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC19.39■□□□□ 0.69
TWISTNBQ3B726 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TWISTNBQ3B726 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
TWISTNBQ3B726 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TWISTNBQ3B726 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
TWISTNBQ3B726 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
TWISTNBQ3B726 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TWISTNBQ3B726 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
TWISTNBQ3B726 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
TWISTNBQ3B726 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
TWISTNBQ3B726 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
TWISTNBQ3B726 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC19.38■□□□□ 0.69
TWISTNBQ3B726 AHCYP2-201ENST00000430630 1300 ntBASIC19.38■□□□□ 0.69
TWISTNBQ3B726 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC19.38■□□□□ 0.69
TWISTNBQ3B726 FAM8A4P-201ENST00000435433 1213 ntBASIC19.38■□□□□ 0.69
TWISTNBQ3B726 AL354989.2-201ENST00000435838 1540 ntBASIC19.38■□□□□ 0.69
TWISTNBQ3B726 BNIP3P42-201ENST00000454982 569 ntBASIC19.38■□□□□ 0.69
TWISTNBQ3B726 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TWISTNBQ3B726 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TWISTNBQ3B726 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TWISTNBQ3B726 PFN2-215ENST00000497148 743 ntTSL 4 BASIC19.38■□□□□ 0.69
TWISTNBQ3B726 FTLP10-202ENST00000505798 471 ntBASIC19.38■□□□□ 0.69
TWISTNBQ3B726 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC19.38■□□□□ 0.69
TWISTNBQ3B726 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC19.38■□□□□ 0.69
TWISTNBQ3B726 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC19.38■□□□□ 0.69
TWISTNBQ3B726 AC079316.1-201ENST00000548397 411 ntBASIC19.38■□□□□ 0.69
TWISTNBQ3B726 NAA38-206ENST00000576384 424 ntTSL 2 BASIC19.38■□□□□ 0.69
TWISTNBQ3B726 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC19.38■□□□□ 0.69
TWISTNBQ3B726 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TWISTNBQ3B726 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TWISTNBQ3B726 BNIP3P29-201ENST00000598302 571 ntBASIC19.38■□□□□ 0.69
TWISTNBQ3B726 AC011447.5-201ENST00000616168 564 ntBASIC19.38■□□□□ 0.69
TWISTNBQ3B726 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC19.38■□□□□ 0.69
TWISTNBQ3B726 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
TWISTNBQ3B726 INE2-201ENST00000630399 1874 ntBASIC19.38■□□□□ 0.69
TWISTNBQ3B726 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC19.38■□□□□ 0.69
TWISTNBQ3B726 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TWISTNBQ3B726 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC19.38■□□□□ 0.69
TWISTNBQ3B726 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC19.38■□□□□ 0.69
TWISTNBQ3B726 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC19.38■□□□□ 0.69
TWISTNBQ3B726 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
TWISTNBQ3B726 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TWISTNBQ3B726 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
TWISTNBQ3B726 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TWISTNBQ3B726 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TWISTNBQ3B726 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
TWISTNBQ3B726 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC19.38■□□□□ 0.69
TWISTNBQ3B726 TSPY26P-202ENST00000565928 3884 ntBASIC19.37■□□□□ 0.69
TWISTNBQ3B726 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC19.37■□□□□ 0.69
TWISTNBQ3B726 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TWISTNBQ3B726 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
TWISTNBQ3B726 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC19.37■□□□□ 0.69
TWISTNBQ3B726 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
TWISTNBQ3B726 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
TWISTNBQ3B726 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC19.37■□□□□ 0.69
TWISTNBQ3B726 TPO-206ENST00000382269 1155 ntTSL 5 BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms