Protein–RNA interactions for Protein: Q00532

CDKL1, Cyclin-dependent kinase-like 1, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1Q00532 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CDKL1Q00532 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CDKL1Q00532 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDKL1Q00532 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC14.99□□□□□ -0.01
CDKL1Q00532 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
CDKL1Q00532 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC14.99□□□□□ -0.01
CDKL1Q00532 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDKL1Q00532 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC14.99□□□□□ -0.01
CDKL1Q00532 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
CDKL1Q00532 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC14.99□□□□□ -0.01
CDKL1Q00532 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC14.99□□□□□ -0.01
CDKL1Q00532 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CDKL1Q00532 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDKL1Q00532 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CDKL1Q00532 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDKL1Q00532 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC14.99□□□□□ -0.01
CDKL1Q00532 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
CDKL1Q00532 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CDKL1Q00532 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDKL1Q00532 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CDKL1Q00532 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC14.99□□□□□ -0.01
CDKL1Q00532 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
CDKL1Q00532 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
CDKL1Q00532 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
CDKL1Q00532 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC14.99□□□□□ -0.01
CDKL1Q00532 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDKL1Q00532 AC026410.3-201ENST00000514280 936 ntBASIC14.99□□□□□ -0.01
CDKL1Q00532 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC14.99□□□□□ -0.01
CDKL1Q00532 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC14.99□□□□□ -0.01
CDKL1Q00532 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CDKL1Q00532 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
CDKL1Q00532 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDKL1Q00532 AC023310.3-201ENST00000557027 670 ntBASIC14.99□□□□□ -0.01
CDKL1Q00532 AC100756.1-201ENST00000562736 682 ntBASIC14.99□□□□□ -0.01
CDKL1Q00532 AC138749.3-201ENST00000567691 622 ntBASIC14.99□□□□□ -0.01
CDKL1Q00532 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC14.99□□□□□ -0.01
CDKL1Q00532 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
CDKL1Q00532 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC14.99□□□□□ -0.01
CDKL1Q00532 AC099568.2-201ENST00000609194 695 ntBASIC14.99□□□□□ -0.01
CDKL1Q00532 AC116165.1-201ENST00000611806 668 ntBASIC14.99□□□□□ -0.01
CDKL1Q00532 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC14.99□□□□□ -0.01
CDKL1Q00532 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC14.99□□□□□ -0.01
CDKL1Q00532 AC107918.4-201ENST00000641966 3141 ntBASIC14.99□□□□□ -0.01
CDKL1Q00532 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDKL1Q00532 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CDKL1Q00532 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDKL1Q00532 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
CDKL1Q00532 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDKL1Q00532 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC14.99□□□□□ -0.01
CDKL1Q00532 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC14.99□□□□□ -0.01
CDKL1Q00532 DRD5P1-201ENST00000456605 1438 ntBASIC14.99□□□□□ -0.01
CDKL1Q00532 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDKL1Q00532 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CDKL1Q00532 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC14.99□□□□□ -0.01
CDKL1Q00532 AC005252.3-201ENST00000623855 2258 ntBASIC14.99□□□□□ -0.01
CDKL1Q00532 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDKL1Q00532 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDKL1Q00532 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CDKL1Q00532 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDKL1Q00532 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CDKL1Q00532 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CDKL1Q00532 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC14.98□□□□□ -0.01
CDKL1Q00532 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDKL1Q00532 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDKL1Q00532 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDKL1Q00532 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC14.98□□□□□ -0.01
CDKL1Q00532 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDKL1Q00532 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDKL1Q00532 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDKL1Q00532 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDKL1Q00532 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC14.98□□□□□ -0.01
CDKL1Q00532 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CDKL1Q00532 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC14.98□□□□□ -0.01
CDKL1Q00532 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC14.98□□□□□ -0.01
CDKL1Q00532 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDKL1Q00532 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC14.98□□□□□ -0.01
CDKL1Q00532 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC14.98□□□□□ -0.01
CDKL1Q00532 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC14.98□□□□□ -0.01
CDKL1Q00532 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC14.98□□□□□ -0.01
CDKL1Q00532 RPL13AP25-201ENST00000484130 612 ntBASIC14.98□□□□□ -0.01
CDKL1Q00532 AC093004.1-201ENST00000508850 424 ntBASIC14.98□□□□□ -0.01
CDKL1Q00532 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC14.98□□□□□ -0.01
CDKL1Q00532 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC14.98□□□□□ -0.01
CDKL1Q00532 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC14.98□□□□□ -0.01
CDKL1Q00532 NAA60-208ENST00000570819 833 ntTSL 2 BASIC14.98□□□□□ -0.01
CDKL1Q00532 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
CDKL1Q00532 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CDKL1Q00532 AC009118.2-201ENST00000613275 655 ntBASIC14.98□□□□□ -0.01
CDKL1Q00532 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDKL1Q00532 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC14.98□□□□□ -0.01
CDKL1Q00532 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CDKL1Q00532 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDKL1Q00532 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
CDKL1Q00532 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDKL1Q00532 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
CDKL1Q00532 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDKL1Q00532 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDKL1Q00532 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CDKL1Q00532 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC14.98□□□□□ -0.01
CDKL1Q00532 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms