Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
SKP1P63208 DBET-201ENST00000630918 3363 ntBASIC14.46□□□□□ -0.1
SKP1P63208 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.1
SKP1P63208 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
SKP1P63208 PPT1-215ENST00000641471 2368 ntBASIC14.46□□□□□ -0.1
SKP1P63208 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
SKP1P63208 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
SKP1P63208 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
SKP1P63208 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
SKP1P63208 AC138035.3-201ENST00000622706 2791 ntBASIC14.45□□□□□ -0.1
SKP1P63208 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SKP1P63208 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
SKP1P63208 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC14.45□□□□□ -0.1
SKP1P63208 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC14.45□□□□□ -0.1
SKP1P63208 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
SKP1P63208 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SKP1P63208 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
SKP1P63208 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
SKP1P63208 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC14.45□□□□□ -0.1
SKP1P63208 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
SKP1P63208 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SKP1P63208 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SKP1P63208 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
SKP1P63208 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC14.45□□□□□ -0.1
SKP1P63208 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC14.45□□□□□ -0.1
SKP1P63208 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SKP1P63208 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC14.45□□□□□ -0.1
SKP1P63208 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC14.45□□□□□ -0.1
SKP1P63208 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SKP1P63208 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SKP1P63208 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC14.45□□□□□ -0.1
SKP1P63208 RPL28-203ENST00000428193 573 ntTSL 2 BASIC14.45□□□□□ -0.1
SKP1P63208 RPL28-204ENST00000431533 590 ntTSL 2 BASIC14.45□□□□□ -0.1
SKP1P63208 AC234783.1-201ENST00000441761 496 ntBASIC14.45□□□□□ -0.1
SKP1P63208 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC14.45□□□□□ -0.1
SKP1P63208 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
SKP1P63208 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC14.45□□□□□ -0.1
SKP1P63208 SLC25A47P1-201ENST00000531577 414 ntBASIC14.45□□□□□ -0.1
SKP1P63208 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC14.45□□□□□ -0.1
SKP1P63208 RPL28-207ENST00000558815 616 ntTSL 2 BASIC14.45□□□□□ -0.1
SKP1P63208 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC14.45□□□□□ -0.1
SKP1P63208 APOC4-201ENST00000591600 348 ntTSL 3 BASIC14.45□□□□□ -0.1
SKP1P63208 AC239800.4-201ENST00000603712 296 ntBASIC14.45□□□□□ -0.1
SKP1P63208 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC14.45□□□□□ -0.1
SKP1P63208 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SKP1P63208 C8orf49-201ENST00000525043 1968 ntBASIC14.45□□□□□ -0.1
SKP1P63208 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC14.45□□□□□ -0.1
SKP1P63208 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC14.45□□□□□ -0.1
SKP1P63208 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SKP1P63208 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SKP1P63208 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SKP1P63208 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SKP1P63208 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
SKP1P63208 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC14.45□□□□□ -0.1
SKP1P63208 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SKP1P63208 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SKP1P63208 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SKP1P63208 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
SKP1P63208 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC14.45□□□□□ -0.1
SKP1P63208 USE1-206ENST00000595101 1776 ntTSL 2 BASIC14.45□□□□□ -0.1
SKP1P63208 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SKP1P63208 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC14.44□□□□□ -0.1
SKP1P63208 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SKP1P63208 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SKP1P63208 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC14.44□□□□□ -0.1
SKP1P63208 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC14.44□□□□□ -0.1
SKP1P63208 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SKP1P63208 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
SKP1P63208 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
SKP1P63208 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SKP1P63208 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SKP1P63208 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SKP1P63208 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SKP1P63208 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SKP1P63208 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
SKP1P63208 LSM5-207ENST00000410044 687 ntTSL 3 BASIC14.44□□□□□ -0.1
SKP1P63208 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC14.44□□□□□ -0.1
SKP1P63208 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC14.44□□□□□ -0.1
SKP1P63208 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC14.44□□□□□ -0.1
SKP1P63208 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SKP1P63208 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
SKP1P63208 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC14.44□□□□□ -0.1
SKP1P63208 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC14.44□□□□□ -0.1
SKP1P63208 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
SKP1P63208 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC14.44□□□□□ -0.1
SKP1P63208 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
SKP1P63208 AL162274.1-201ENST00000617191 1098 ntBASIC14.44□□□□□ -0.1
SKP1P63208 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SKP1P63208 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
SKP1P63208 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SKP1P63208 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SKP1P63208 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
SKP1P63208 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
SKP1P63208 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
SKP1P63208 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
SKP1P63208 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
SKP1P63208 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SKP1P63208 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SKP1P63208 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SKP1P63208 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms