Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
CDC42P60953 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CDC42P60953 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC13.95□□□□□ -0.18
CDC42P60953 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC13.95□□□□□ -0.18
CDC42P60953 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDC42P60953 AC011474.4-201ENST00000623523 2076 ntBASIC13.95□□□□□ -0.18
CDC42P60953 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDC42P60953 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CDC42P60953 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDC42P60953 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
CDC42P60953 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDC42P60953 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CDC42P60953 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC13.95□□□□□ -0.18
CDC42P60953 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDC42P60953 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC13.95□□□□□ -0.18
CDC42P60953 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CDC42P60953 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC13.95□□□□□ -0.18
CDC42P60953 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC13.95□□□□□ -0.18
CDC42P60953 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC13.95□□□□□ -0.18
CDC42P60953 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDC42P60953 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
CDC42P60953 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
CDC42P60953 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDC42P60953 AL133267.1-201ENST00000398220 340 ntBASIC13.95□□□□□ -0.18
CDC42P60953 AC104457.1-201ENST00000401024 814 ntBASIC13.95□□□□□ -0.18
CDC42P60953 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC13.95□□□□□ -0.18
CDC42P60953 HNRNPA1P28-201ENST00000424481 961 ntBASIC13.95□□□□□ -0.18
CDC42P60953 SPCS2P4-201ENST00000436160 681 ntBASIC13.95□□□□□ -0.18
CDC42P60953 TARDBPP1-201ENST00000442013 1203 ntBASIC13.95□□□□□ -0.18
CDC42P60953 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC13.95□□□□□ -0.18
CDC42P60953 PFN2-205ENST00000461868 613 ntTSL 2 BASIC13.95□□□□□ -0.18
CDC42P60953 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDC42P60953 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC13.95□□□□□ -0.18
CDC42P60953 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC13.95□□□□□ -0.18
CDC42P60953 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CDC42P60953 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC13.95□□□□□ -0.18
CDC42P60953 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC13.95□□□□□ -0.18
CDC42P60953 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
CDC42P60953 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
CDC42P60953 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC13.95□□□□□ -0.18
CDC42P60953 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CDC42P60953 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC13.95□□□□□ -0.18
CDC42P60953 SSH2-211ENST00000590153 570 ntTSL 4 BASIC13.95□□□□□ -0.18
CDC42P60953 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC13.95□□□□□ -0.18
CDC42P60953 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDC42P60953 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CDC42P60953 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CDC42P60953 AC091812.2-201ENST00000619081 385 ntBASIC13.95□□□□□ -0.18
CDC42P60953 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC13.95□□□□□ -0.18
CDC42P60953 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDC42P60953 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDC42P60953 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CDC42P60953 MST1P2-201ENST00000457982 2291 ntBASIC13.95□□□□□ -0.18
CDC42P60953 AC005252.3-201ENST00000623855 2258 ntBASIC13.95□□□□□ -0.18
CDC42P60953 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC13.95□□□□□ -0.18
CDC42P60953 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDC42P60953 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC13.95□□□□□ -0.18
CDC42P60953 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC13.95□□□□□ -0.18
CDC42P60953 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDC42P60953 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDC42P60953 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDC42P60953 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC13.95□□□□□ -0.18
CDC42P60953 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDC42P60953 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDC42P60953 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC13.95□□□□□ -0.18
CDC42P60953 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDC42P60953 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC13.95□□□□□ -0.18
CDC42P60953 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CDC42P60953 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC13.94□□□□□ -0.18
CDC42P60953 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC13.94□□□□□ -0.18
CDC42P60953 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
CDC42P60953 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CDC42P60953 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CDC42P60953 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC13.94□□□□□ -0.18
CDC42P60953 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC13.94□□□□□ -0.18
CDC42P60953 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC13.94□□□□□ -0.18
CDC42P60953 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
CDC42P60953 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CDC42P60953 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CDC42P60953 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
CDC42P60953 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC13.94□□□□□ -0.18
CDC42P60953 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CDC42P60953 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
CDC42P60953 RET-205ENST00000615310 4337 ntTSL 5 BASIC13.94□□□□□ -0.18
CDC42P60953 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CDC42P60953 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CDC42P60953 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
CDC42P60953 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CDC42P60953 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CDC42P60953 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CDC42P60953 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CDC42P60953 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CDC42P60953 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CDC42P60953 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CDC42P60953 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC13.94□□□□□ -0.18
CDC42P60953 MRPL3P1-201ENST00000400109 1033 ntBASIC13.94□□□□□ -0.18
CDC42P60953 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
CDC42P60953 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC13.94□□□□□ -0.18
CDC42P60953 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC13.94□□□□□ -0.18
CDC42P60953 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 62.3 ms