Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC16.27■□□□□ 0.2
SSR1P43307 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC16.27■□□□□ 0.2
SSR1P43307 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SSR1P43307 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
SSR1P43307 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SSR1P43307 HLA-DRB6-201ENST00000411500 1235 ntBASIC16.27■□□□□ 0.2
SSR1P43307 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC16.27■□□□□ 0.2
SSR1P43307 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC16.27■□□□□ 0.2
SSR1P43307 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC16.27■□□□□ 0.2
SSR1P43307 MPI-209ENST00000564003 1195 ntTSL 2 BASIC16.27■□□□□ 0.2
SSR1P43307 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC16.27■□□□□ 0.2
SSR1P43307 UBL5-208ENST00000593087 320 ntTSL 3 BASIC16.27■□□□□ 0.2
SSR1P43307 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC16.27■□□□□ 0.2
SSR1P43307 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
SSR1P43307 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SSR1P43307 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC16.27■□□□□ 0.2
SSR1P43307 GPI-205ENST00000586425 1799 ntTSL 5 BASIC16.27■□□□□ 0.2
SSR1P43307 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
SSR1P43307 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
SSR1P43307 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
SSR1P43307 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC16.27■□□□□ 0.19
SSR1P43307 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
SSR1P43307 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SSR1P43307 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
SSR1P43307 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
SSR1P43307 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SSR1P43307 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
SSR1P43307 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
SSR1P43307 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SSR1P43307 USP3-204ENST00000540797 5474 ntTSL 2 BASIC16.27■□□□□ 0.19
SSR1P43307 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SSR1P43307 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
SSR1P43307 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
SSR1P43307 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC16.26■□□□□ 0.19
SSR1P43307 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SSR1P43307 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC16.26■□□□□ 0.19
SSR1P43307 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
SSR1P43307 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC16.26■□□□□ 0.19
SSR1P43307 WASH3P-207ENST00000560956 1394 ntBASIC16.26■□□□□ 0.19
SSR1P43307 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC16.26■□□□□ 0.19
SSR1P43307 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SSR1P43307 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SSR1P43307 CICP23-201ENST00000605013 2741 ntBASIC16.26■□□□□ 0.19
SSR1P43307 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SSR1P43307 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SSR1P43307 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SSR1P43307 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
SSR1P43307 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SSR1P43307 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC16.26■□□□□ 0.19
SSR1P43307 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SSR1P43307 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
SSR1P43307 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC16.26■□□□□ 0.19
SSR1P43307 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SSR1P43307 GRK6P1-201ENST00000400595 1711 ntBASIC16.26■□□□□ 0.19
SSR1P43307 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SSR1P43307 ZBED1P1-201ENST00000502364 1930 ntBASIC16.26■□□□□ 0.19
SSR1P43307 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
SSR1P43307 AL133267.1-201ENST00000398220 340 ntBASIC16.26■□□□□ 0.19
SSR1P43307 RPL13P2-201ENST00000440687 659 ntBASIC16.26■□□□□ 0.19
SSR1P43307 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC16.26■□□□□ 0.19
SSR1P43307 PFN2-205ENST00000461868 613 ntTSL 2 BASIC16.26■□□□□ 0.19
SSR1P43307 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC16.26■□□□□ 0.19
SSR1P43307 AC097493.3-201ENST00000509725 367 ntBASIC16.26■□□□□ 0.19
SSR1P43307 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC16.26■□□□□ 0.19
SSR1P43307 TIMM17BP1-201ENST00000545713 516 ntBASIC16.26■□□□□ 0.19
SSR1P43307 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC16.26■□□□□ 0.19
SSR1P43307 RAB34-223ENST00000636154 730 ntTSL 2 BASIC16.26■□□□□ 0.19
SSR1P43307 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
SSR1P43307 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SSR1P43307 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SSR1P43307 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC16.26■□□□□ 0.19
SSR1P43307 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC16.26■□□□□ 0.19
SSR1P43307 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SSR1P43307 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SSR1P43307 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
SSR1P43307 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SSR1P43307 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SSR1P43307 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SSR1P43307 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SSR1P43307 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SSR1P43307 AL121723.1-201ENST00000445194 1519 ntBASIC16.25■□□□□ 0.19
SSR1P43307 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SSR1P43307 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
SSR1P43307 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC16.25■□□□□ 0.19
SSR1P43307 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SSR1P43307 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
SSR1P43307 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
SSR1P43307 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
SSR1P43307 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SSR1P43307 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SSR1P43307 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SSR1P43307 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC16.25■□□□□ 0.19
SSR1P43307 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
SSR1P43307 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SSR1P43307 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
SSR1P43307 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SSR1P43307 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SSR1P43307 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SSR1P43307 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC16.25■□□□□ 0.19
SSR1P43307 URGCP-206ENST00000446958 365 ntTSL 2 BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms