Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC12.67□□□□□ -0.38
CTSDP07339 AL591424.1-201ENST00000442569 1213 ntBASIC12.67□□□□□ -0.38
CTSDP07339 KRT18P3-201ENST00000451602 1288 ntBASIC12.67□□□□□ -0.38
CTSDP07339 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC12.67□□□□□ -0.38
CTSDP07339 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC12.67□□□□□ -0.38
CTSDP07339 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC12.67□□□□□ -0.38
CTSDP07339 SLC25A39P2-201ENST00000537614 270 ntBASIC12.67□□□□□ -0.38
CTSDP07339 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC12.67□□□□□ -0.38
CTSDP07339 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC12.67□□□□□ -0.38
CTSDP07339 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC12.67□□□□□ -0.38
CTSDP07339 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC12.67□□□□□ -0.38
CTSDP07339 AC092865.6-201ENST00000642101 219 ntBASIC12.67□□□□□ -0.38
CTSDP07339 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CTSDP07339 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC12.67□□□□□ -0.38
CTSDP07339 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CTSDP07339 DEK-201ENST00000244776 1441 ntTSL 2 BASIC12.67□□□□□ -0.38
CTSDP07339 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC12.67□□□□□ -0.38
CTSDP07339 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
CTSDP07339 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
CTSDP07339 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CTSDP07339 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CTSDP07339 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CTSDP07339 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CTSDP07339 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CTSDP07339 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CTSDP07339 UXT-AS1-201ENST00000590504 1525 ntBASIC12.67□□□□□ -0.38
CTSDP07339 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
CTSDP07339 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC12.67□□□□□ -0.38
CTSDP07339 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CTSDP07339 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC12.66□□□□□ -0.38
CTSDP07339 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CTSDP07339 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
CTSDP07339 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CTSDP07339 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC12.66□□□□□ -0.38
CTSDP07339 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CTSDP07339 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
CTSDP07339 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CTSDP07339 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC12.66□□□□□ -0.38
CTSDP07339 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC12.66□□□□□ -0.38
CTSDP07339 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
CTSDP07339 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
CTSDP07339 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
CTSDP07339 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC12.66□□□□□ -0.38
CTSDP07339 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CTSDP07339 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
CTSDP07339 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
CTSDP07339 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CTSDP07339 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CTSDP07339 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
CTSDP07339 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC12.66□□□□□ -0.38
CTSDP07339 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
CTSDP07339 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
CTSDP07339 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CTSDP07339 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
CTSDP07339 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CTSDP07339 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
CTSDP07339 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
CTSDP07339 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC12.66□□□□□ -0.38
CTSDP07339 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC12.66□□□□□ -0.38
CTSDP07339 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC12.66□□□□□ -0.38
CTSDP07339 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC12.66□□□□□ -0.38
CTSDP07339 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC12.66□□□□□ -0.38
CTSDP07339 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC12.66□□□□□ -0.38
CTSDP07339 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC12.66□□□□□ -0.38
CTSDP07339 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
CTSDP07339 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CTSDP07339 FAM197Y3-203ENST00000618346 717 ntBASIC12.66□□□□□ -0.38
CTSDP07339 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC12.66□□□□□ -0.38
CTSDP07339 AC092902.6-201ENST00000641783 218 ntBASIC12.66□□□□□ -0.38
CTSDP07339 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CTSDP07339 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
CTSDP07339 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC12.66□□□□□ -0.38
CTSDP07339 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
CTSDP07339 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
CTSDP07339 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC12.66□□□□□ -0.38
CTSDP07339 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC12.66□□□□□ -0.38
CTSDP07339 DKFZP434A062-201ENST00000573103 5021 ntBASIC12.66□□□□□ -0.38
CTSDP07339 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CTSDP07339 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC12.66□□□□□ -0.38
CTSDP07339 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CTSDP07339 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC12.66□□□□□ -0.38
CTSDP07339 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CTSDP07339 AC018665.1-201ENST00000622927 1362 ntBASIC12.66□□□□□ -0.38
CTSDP07339 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CTSDP07339 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CTSDP07339 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CTSDP07339 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CTSDP07339 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CTSDP07339 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CTSDP07339 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC12.65□□□□□ -0.38
CTSDP07339 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CTSDP07339 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CTSDP07339 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CTSDP07339 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC12.65□□□□□ -0.38
CTSDP07339 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC12.65□□□□□ -0.38
CTSDP07339 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC12.65□□□□□ -0.38
CTSDP07339 AL354702.1-201ENST00000442006 1960 ntBASIC12.65□□□□□ -0.38
CTSDP07339 MVK-214ENST00000629016 1591 ntTSL 5 BASIC12.65□□□□□ -0.38
CTSDP07339 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CTSDP07339 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms