Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
HLA-DQB2P05538 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HLA-DQB2P05538 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC15.38■□□□□ 0.05
HLA-DQB2P05538 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
HLA-DQB2P05538 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC15.38■□□□□ 0.05
HLA-DQB2P05538 COX20P2-201ENST00000452636 358 ntBASIC15.38■□□□□ 0.05
HLA-DQB2P05538 AC007389.4-201ENST00000454674 793 ntBASIC15.38■□□□□ 0.05
HLA-DQB2P05538 AC106760.1-201ENST00000508690 800 ntBASIC15.38■□□□□ 0.05
HLA-DQB2P05538 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
HLA-DQB2P05538 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
HLA-DQB2P05538 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
HLA-DQB2P05538 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC15.38■□□□□ 0.05
HLA-DQB2P05538 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC15.38■□□□□ 0.05
HLA-DQB2P05538 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC15.38■□□□□ 0.05
HLA-DQB2P05538 AL358472.5-202ENST00000641448 1267 ntBASIC15.38■□□□□ 0.05
HLA-DQB2P05538 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HLA-DQB2P05538 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HLA-DQB2P05538 AC018442.1-201ENST00000421439 2061 ntBASIC15.38■□□□□ 0.05
HLA-DQB2P05538 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HLA-DQB2P05538 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
HLA-DQB2P05538 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC15.38■□□□□ 0.05
HLA-DQB2P05538 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC15.38■□□□□ 0.05
HLA-DQB2P05538 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
HLA-DQB2P05538 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HLA-DQB2P05538 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
HLA-DQB2P05538 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HLA-DQB2P05538 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
HLA-DQB2P05538 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC15.38■□□□□ 0.05
HLA-DQB2P05538 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC15.38■□□□□ 0.05
HLA-DQB2P05538 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
HLA-DQB2P05538 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC15.38■□□□□ 0.05
HLA-DQB2P05538 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
HLA-DQB2P05538 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC15.38■□□□□ 0.05
HLA-DQB2P05538 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HLA-DQB2P05538 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
HLA-DQB2P05538 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HLA-DQB2P05538 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HLA-DQB2P05538 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
HLA-DQB2P05538 ANKRD26P3-201ENST00000454044 2748 ntBASIC15.37■□□□□ 0.05
HLA-DQB2P05538 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC15.37■□□□□ 0.05
HLA-DQB2P05538 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
HLA-DQB2P05538 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
HLA-DQB2P05538 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC15.37■□□□□ 0.05
HLA-DQB2P05538 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
HLA-DQB2P05538 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC15.37■□□□□ 0.05
HLA-DQB2P05538 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HLA-DQB2P05538 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HLA-DQB2P05538 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HLA-DQB2P05538 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC15.37■□□□□ 0.05
HLA-DQB2P05538 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
HLA-DQB2P05538 CU639417.3-201ENST00000624240 1404 ntBASIC15.37■□□□□ 0.05
HLA-DQB2P05538 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
HLA-DQB2P05538 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
HLA-DQB2P05538 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC15.37■□□□□ 0.05
HLA-DQB2P05538 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
HLA-DQB2P05538 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HLA-DQB2P05538 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HLA-DQB2P05538 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC15.37■□□□□ 0.05
HLA-DQB2P05538 AL512384.1-201ENST00000406683 331 ntBASIC15.37■□□□□ 0.05
HLA-DQB2P05538 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC15.37■□□□□ 0.05
HLA-DQB2P05538 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC15.37■□□□□ 0.05
HLA-DQB2P05538 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC15.37■□□□□ 0.05
HLA-DQB2P05538 AP001889.1-201ENST00000525414 633 ntBASIC15.37■□□□□ 0.05
HLA-DQB2P05538 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
HLA-DQB2P05538 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
HLA-DQB2P05538 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
HLA-DQB2P05538 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC15.37■□□□□ 0.05
HLA-DQB2P05538 AC004466.1-201ENST00000599515 1080 ntBASIC15.37■□□□□ 0.05
HLA-DQB2P05538 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC15.37■□□□□ 0.05
HLA-DQB2P05538 LINC02084-201ENST00000606069 1096 ntBASIC15.37■□□□□ 0.05
HLA-DQB2P05538 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
HLA-DQB2P05538 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC15.37■□□□□ 0.05
HLA-DQB2P05538 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HLA-DQB2P05538 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
HLA-DQB2P05538 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC15.37■□□□□ 0.05
HLA-DQB2P05538 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
HLA-DQB2P05538 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC15.37■□□□□ 0.05
HLA-DQB2P05538 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
HLA-DQB2P05538 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HLA-DQB2P05538 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HLA-DQB2P05538 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
HLA-DQB2P05538 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HLA-DQB2P05538 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
HLA-DQB2P05538 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
HLA-DQB2P05538 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
HLA-DQB2P05538 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC15.37■□□□□ 0.05
HLA-DQB2P05538 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC15.37■□□□□ 0.05
HLA-DQB2P05538 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
HLA-DQB2P05538 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HLA-DQB2P05538 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
HLA-DQB2P05538 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
HLA-DQB2P05538 MTHFR-210ENST00000641407 2387 ntBASIC15.36■□□□□ 0.05
HLA-DQB2P05538 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC15.36■□□□□ 0.05
HLA-DQB2P05538 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HLA-DQB2P05538 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC15.36■□□□□ 0.05
HLA-DQB2P05538 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
HLA-DQB2P05538 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC15.36■□□□□ 0.05
HLA-DQB2P05538 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
HLA-DQB2P05538 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
HLA-DQB2P05538 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms