Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
TCRAP04437 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
TCRAP04437 LILRP1-201ENST00000444199 1370 ntBASIC11.62□□□□□ -0.55
TCRAP04437 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
TCRAP04437 AC005252.3-201ENST00000623855 2258 ntBASIC11.62□□□□□ -0.55
TCRAP04437 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
TCRAP04437 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
TCRAP04437 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
TCRAP04437 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
TCRAP04437 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
TCRAP04437 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
TCRAP04437 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC11.62□□□□□ -0.55
TCRAP04437 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
TCRAP04437 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
TCRAP04437 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC11.61□□□□□ -0.55
TCRAP04437 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
TCRAP04437 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC11.61□□□□□ -0.55
TCRAP04437 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
TCRAP04437 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
TCRAP04437 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
TCRAP04437 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
TCRAP04437 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
TCRAP04437 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
TCRAP04437 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
TCRAP04437 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
TCRAP04437 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC11.61□□□□□ -0.55
TCRAP04437 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
TCRAP04437 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
TCRAP04437 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
TCRAP04437 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
TCRAP04437 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC11.61□□□□□ -0.55
TCRAP04437 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
TCRAP04437 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
TCRAP04437 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC11.61□□□□□ -0.55
TCRAP04437 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
TCRAP04437 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
TCRAP04437 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
TCRAP04437 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC11.61□□□□□ -0.55
TCRAP04437 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC11.61□□□□□ -0.55
TCRAP04437 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
TCRAP04437 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC11.61□□□□□ -0.55
TCRAP04437 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC11.61□□□□□ -0.55
TCRAP04437 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC11.61□□□□□ -0.55
TCRAP04437 GATB-205ENST00000508611 605 ntTSL 2 BASIC11.61□□□□□ -0.55
TCRAP04437 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC11.61□□□□□ -0.55
TCRAP04437 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC11.61□□□□□ -0.55
TCRAP04437 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC11.61□□□□□ -0.55
TCRAP04437 AC055717.3-201ENST00000622967 595 ntBASIC11.61□□□□□ -0.55
TCRAP04437 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC11.61□□□□□ -0.55
TCRAP04437 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
TCRAP04437 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
TCRAP04437 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
TCRAP04437 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
TCRAP04437 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC11.61□□□□□ -0.55
TCRAP04437 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC11.61□□□□□ -0.55
TCRAP04437 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
TCRAP04437 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC11.61□□□□□ -0.55
TCRAP04437 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
TCRAP04437 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
TCRAP04437 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
TCRAP04437 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC11.61□□□□□ -0.55
TCRAP04437 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC11.61□□□□□ -0.55
TCRAP04437 HLA-A-201ENST00000376802 1334 ntBASIC11.6□□□□□ -0.55
TCRAP04437 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC11.6□□□□□ -0.55
TCRAP04437 DEK-201ENST00000244776 1441 ntTSL 2 BASIC11.6□□□□□ -0.55
TCRAP04437 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
TCRAP04437 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC11.6□□□□□ -0.55
TCRAP04437 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
TCRAP04437 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC11.6□□□□□ -0.55
TCRAP04437 IMPDH1P4-201ENST00000445028 1534 ntBASIC11.6□□□□□ -0.55
TCRAP04437 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
TCRAP04437 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
TCRAP04437 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
TCRAP04437 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC11.6□□□□□ -0.55
TCRAP04437 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC11.6□□□□□ -0.55
TCRAP04437 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
TCRAP04437 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
TCRAP04437 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC11.6□□□□□ -0.55
TCRAP04437 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC11.6□□□□□ -0.55
TCRAP04437 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC11.6□□□□□ -0.55
TCRAP04437 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
TCRAP04437 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
TCRAP04437 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
TCRAP04437 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC11.6□□□□□ -0.55
TCRAP04437 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC11.6□□□□□ -0.55
TCRAP04437 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC11.6□□□□□ -0.55
TCRAP04437 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
TCRAP04437 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC11.6□□□□□ -0.55
TCRAP04437 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC11.6□□□□□ -0.55
TCRAP04437 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
TCRAP04437 FUK-202ENST00000378912 3925 ntTSL 2 BASIC11.6□□□□□ -0.55
TCRAP04437 RPS19-201ENST00000221975 500 ntTSL 3 BASIC11.6□□□□□ -0.55
TCRAP04437 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
TCRAP04437 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
TCRAP04437 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
TCRAP04437 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
TCRAP04437 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
TCRAP04437 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC11.6□□□□□ -0.55
TCRAP04437 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
TCRAP04437 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 68.6 ms