Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC15.02■□□□□ -0
PDGFBP01127 THY1-209ENST00000580275 578 ntTSL 3 BASIC15.02■□□□□ -0
PDGFBP01127 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC15.02■□□□□ -0
PDGFBP01127 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PDGFBP01127 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
PDGFBP01127 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PDGFBP01127 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
PDGFBP01127 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PDGFBP01127 AC092364.2-201ENST00000596710 2692 ntBASIC15.02□□□□□ -0.01
PDGFBP01127 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
PDGFBP01127 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC15.02□□□□□ -0.01
PDGFBP01127 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PDGFBP01127 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC15.02□□□□□ -0.01
PDGFBP01127 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC15.02□□□□□ -0.01
PDGFBP01127 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
PDGFBP01127 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC15.02□□□□□ -0.01
PDGFBP01127 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC15.02□□□□□ -0.01
PDGFBP01127 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PDGFBP01127 AL359258.3-201ENST00000622910 2331 ntBASIC15.01□□□□□ -0.01
PDGFBP01127 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
PDGFBP01127 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PDGFBP01127 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC15.01□□□□□ -0.01
PDGFBP01127 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC15.01□□□□□ -0.01
PDGFBP01127 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
PDGFBP01127 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PDGFBP01127 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
PDGFBP01127 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PDGFBP01127 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC15.01□□□□□ -0.01
PDGFBP01127 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PDGFBP01127 OBSCN-AS1-201ENST00000295012 889 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PDGFBP01127 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PDGFBP01127 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PDGFBP01127 RNA5SP359-201ENST00000364838 113 ntBASIC15.01□□□□□ -0.01
PDGFBP01127 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PDGFBP01127 HLA-DMA-203ENST00000395305 777 ntBASIC15.01□□□□□ -0.01
PDGFBP01127 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PDGFBP01127 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PDGFBP01127 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PDGFBP01127 LINC01278-201ENST00000433061 529 ntTSL 3 BASIC15.01□□□□□ -0.01
PDGFBP01127 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC15.01□□□□□ -0.01
PDGFBP01127 AL645933.1-201ENST00000440087 609 ntBASIC15.01□□□□□ -0.01
PDGFBP01127 CICP12-201ENST00000455801 843 ntBASIC15.01□□□□□ -0.01
PDGFBP01127 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC15.01□□□□□ -0.01
PDGFBP01127 FABP5P3-202ENST00000477993 1027 ntTSL 5 BASIC15.01□□□□□ -0.01
PDGFBP01127 AL365275.1-201ENST00000518570 471 ntTSL 2 BASIC15.01□□□□□ -0.01
PDGFBP01127 ZNF268-210ENST00000541211 781 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PDGFBP01127 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PDGFBP01127 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC15.01□□□□□ -0.01
PDGFBP01127 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC15.01□□□□□ -0.01
PDGFBP01127 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC15.01□□□□□ -0.01
PDGFBP01127 LINC01278-206ENST00000610088 554 ntTSL 4 BASIC15.01□□□□□ -0.01
PDGFBP01127 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC15.01□□□□□ -0.01
PDGFBP01127 AC011471.3-201ENST00000623576 402 ntBASIC15.01□□□□□ -0.01
PDGFBP01127 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC15.01□□□□□ -0.01
PDGFBP01127 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC15.01□□□□□ -0.01
PDGFBP01127 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
PDGFBP01127 ILF3-AS1-201ENST00000591501 1983 ntBASIC15.01□□□□□ -0.01
PDGFBP01127 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
PDGFBP01127 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PDGFBP01127 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
PDGFBP01127 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PDGFBP01127 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC15.01□□□□□ -0.01
PDGFBP01127 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC15.01□□□□□ -0.01
PDGFBP01127 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PDGFBP01127 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PDGFBP01127 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC15.01□□□□□ -0.01
PDGFBP01127 SLC9A7P1-202ENST00000556476 2239 ntBASIC15.01□□□□□ -0.01
PDGFBP01127 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PDGFBP01127 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PDGFBP01127 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC15.01□□□□□ -0.01
PDGFBP01127 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PDGFBP01127 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PDGFBP01127 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC15.01□□□□□ -0.01
PDGFBP01127 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PDGFBP01127 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PDGFBP01127 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC15□□□□□ -0.01
PDGFBP01127 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC15□□□□□ -0.01
PDGFBP01127 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
PDGFBP01127 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC15□□□□□ -0.01
PDGFBP01127 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PDGFBP01127 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
PDGFBP01127 AL138725.1-201ENST00000407347 1314 ntBASIC15□□□□□ -0.01
PDGFBP01127 PRORSD1P-202ENST00000563365 2154 ntBASIC15□□□□□ -0.01
PDGFBP01127 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
PDGFBP01127 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
PDGFBP01127 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
PDGFBP01127 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PDGFBP01127 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PDGFBP01127 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PDGFBP01127 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC15□□□□□ -0.01
PDGFBP01127 PRKAR2A-AS1-203ENST00000431705 592 ntTSL 4 BASIC15□□□□□ -0.01
PDGFBP01127 PRRC2B-207ENST00000458550 899 ntTSL 1 (best) BASIC15□□□□□ -0.01
PDGFBP01127 AC109479.3-201ENST00000520163 360 ntTSL 3 BASIC15□□□□□ -0.01
PDGFBP01127 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC15□□□□□ -0.01
PDGFBP01127 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC15□□□□□ -0.01
PDGFBP01127 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC15□□□□□ -0.01
PDGFBP01127 AC055811.3-201ENST00000584952 686 ntBASIC15□□□□□ -0.01
PDGFBP01127 HMGB1P24-201ENST00000611897 328 ntBASIC15□□□□□ -0.01
PDGFBP01127 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC15□□□□□ -0.01
PDGFBP01127 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms